RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 TSPY3P0CV98 308 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 TSPY8P0CW00 308 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 EEF2P13639 858 aaKnown RBP19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 MAPK4P31152 587 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 MFAP1P55081 439 aaKnown RBP19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 PLS1Q14651 629 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 LPAR1Q92633 364 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 IVNS1ABPQ9Y6Y0 642 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 RBBP6Q7Z6E9 1792 aaKnown RBP19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 ROBO3Q96MS0 1386 aa19.95■□□□□ 0.78
TSPAN9-204ENST00000444315 PEX10O60683 326 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 PPARAQ07869 468 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 MCMDC2Q4G0Z9 681 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 NUDT12Q9BQG2 462 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 RNF208Q9H0X6 261 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 VCPKMTQ9H867 229 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 TXNRD2Q9NNW7 524 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 RABGAP1Q9Y3P9 1069 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 CTDP1Q9Y5B0 961 aaPredicted RBP19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 MYH4Q9Y623 1939 aa19.94■□□□□ 0.78
TSPAN9-204ENST00000444315 DOCK3Q8IZD9 2030 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 EN2P19622 333 aaPredicted RBP19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 CYP2B6P20813 491 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 RASA1P20936 1047 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 NMIQ13287 307 aaPredicted RBP19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 COG2Q14746 738 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 PLEKHM2Q8IWE5 1019 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 SOCS4Q8WXH5 440 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 FAM227BQ96M60 508 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 HOXC10Q9NYD6 342 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 TMX2Q9Y320 296 aa19.93■□□□□ 0.78
TSPAN9-204ENST00000444315 WDR46O15213 610 aaKnown RBP19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 INHAP05111 366 aa19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 CCL5P13501 91 aa19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 IRF5Q13568 498 aa19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 MTFR1Q15390 333 aa19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 PLEKHH3Q7Z736 793 aa19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 RBPJLQ9UBG7 517 aa19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 KIAA0100Q14667 2235 aaKnown RBP19.92■□□□□ 0.78
TSPAN9-204ENST00000444315 A0A0D9SFI3 127 aa19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 SPDYE16A6NNV3 312 aaPredicted RBP19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 HIP1O00291 1037 aa19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 CTDSPL2Q05D32 466 aa19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 RRP12Q5JTH9 1297 aaKnown RBP19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 NKX2-3Q8TAU0 364 aa19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 CLIP2Q9UDT6 1046 aa19.91■□□□□ 0.78
TSPAN9-204ENST00000444315 HTTP42858 3142 aa19.9■□□□□ 0.78
TSPAN9-204ENST00000444315 RGS2P41220 211 aa19.9■□□□□ 0.78
TSPAN9-204ENST00000444315 GPR142Q7Z601 462 aa19.9■□□□□ 0.78
TSPAN9-204ENST00000444315 PXYLP1Q8TE99 480 aa19.9■□□□□ 0.78
TSPAN9-204ENST00000444315 PORCNQ9H237 461 aa19.9■□□□□ 0.78
TSPAN9-204ENST00000444315 CCDC171Q6TFL3 1326 aa19.9■□□□□ 0.78
TSPAN9-204ENST00000444315 RANBP6O60518 1105 aaKnown RBP19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 HMGCRP04035 888 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 ZKSCAN1P17029 563 aaPredicted RBP19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 SDSP20132 328 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 TFAP4Q01664 338 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 IKQ13123 557 aaPredicted RBP19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 Q3C1V9 767 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 FAM47AQ5JRC9 791 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 FAM83BQ5T0W9 1011 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 VPS53Q5VIR6 699 aa19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 CWC27Q6UX04 472 aaKnown RBP19.89■□□□□ 0.77
TSPAN9-204ENST00000444315 CENPFP49454 3210 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 TTLL1O95922 423 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 PPP4R3BQ5MIZ7 849 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 NCAPG2Q86XI2 1143 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 TICAM2Q86XR7 235 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 LRRC47Q8N1G4 583 aaKnown RBP19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 MB21D1Q8N884 522 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 ATG4CQ96DT6 458 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 UNC93B1Q9H1C4 597 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 OSBPL3Q9H4L5 887 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 BTBD7Q9P203 1132 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 NYAP2Q9P242 653 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 PLXNB2O15031 1838 aa19.88■□□□□ 0.77
TSPAN9-204ENST00000444315 GREB1LQ9C091 1923 aaPredicted RBP19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 DSG3P32926 999 aa19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 SLC4A3P48751 1232 aa19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 KIAA1755Q5JYT7 1200 aa19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 TRMT44Q8IYL2 757 aaKnown RBP19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 CEP95Q96GE4 821 aa19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 STX8Q9UNK0 236 aa19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 MTMR7Q9Y216 660 aa19.87■□□□□ 0.77
TSPAN9-204ENST00000444315 CNMDO75829 334 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 TFRCP02786 760 aaKnown RBP19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 HAND2P61296 217 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 LBX2Q6XYB7 198 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 SIAH1Q8IUQ4 282 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 CHMP4CQ96CF2 233 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 NUP88Q99567 741 aaPredicted RBP19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 APBA2Q99767 749 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 SPATC1LQ9H0A9 340 aa19.86■□□□□ 0.77
TSPAN9-204ENST00000444315 F5H6K3 240 aa19.85■□□□□ 0.77
TSPAN9-204ENST00000444315 HSPD1P10809 573 aaKnown RBP19.85■□□□□ 0.77
TSPAN9-204ENST00000444315 KLRC3Q07444 240 aa19.85■□□□□ 0.77
TSPAN9-204ENST00000444315 DPP9Q86TI2 863 aa19.85■□□□□ 0.77
TSPAN9-204ENST00000444315 ZNF589Q86UQ0 364 aaPredicted RBP19.85■□□□□ 0.77
TSPAN9-204ENST00000444315 NEDD1Q8NHV4 660 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms