RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 FBF1Q8TES7 1133 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 CCDC17Q96LX7 622 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.41
FN1-211ENST00000443816 FNBP4Q8N3X1 1017 aaPredicted RBP12.46□□□□□ -0.41
FN1-211ENST00000443816 ZSCAN10Q96SZ4 725 aaPredicted RBP12.46□□□□□ -0.41
FN1-211ENST00000443816 PCDHB13Q9Y5F0 798 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 EXOC3O60645 756 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 ICA1Q05084 483 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 GIMAP7Q8NHV1 300 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 KLHDC4Q8TBB5 520 aa12.46□□□□□ -0.41
FN1-211ENST00000443816 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.42
FN1-211ENST00000443816 ZWINTO95229 277 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 VAV2P52735 878 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 PPANQ9NQ55 473 aaKnown RBP12.46□□□□□ -0.42
FN1-211ENST00000443816 A0A1B0GVL5 298 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 PRDM1O75626 825 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 TNNC2P02585 160 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 FAM102BQ5T8I3 360 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 MIS12Q9H081 205 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 PCDHA12Q9UN75 941 aa12.46□□□□□ -0.42
FN1-211ENST00000443816 POLGP54098 1239 aaPredicted RBP12.45□□□□□ -0.42
FN1-211ENST00000443816 SLC17A8Q8NDX2 589 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 ABCD1P33897 745 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 TERF1P54274 439 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 FAM160A1Q05DH4 1040 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 CACYBPQ9HB71 228 aaKnown RBP12.45□□□□□ -0.42
FN1-211ENST00000443816 MED23Q9ULK4 1368 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 TUBBP07437 444 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.45□□□□□ -0.42
FN1-211ENST00000443816 LIG4P49917 911 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 CHRNDQ07001 517 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 KCTD2Q14681 263 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 SLC9C1Q4G0N8 1177 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 ELMSAN1Q6PJG2 1045 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 FRMPD2Q68DX3 1309 aaPredicted RBP12.45□□□□□ -0.42
FN1-211ENST00000443816 BTDP43251 543 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 NUCKS1Q9H1E3 243 aaKnown RBP12.45□□□□□ -0.42
FN1-211ENST00000443816 IFNKQ9P0W0 207 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 XPOTO43592 962 aaKnown RBP12.45□□□□□ -0.42
FN1-211ENST00000443816 OATP04181 439 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 NPR1P16066 1061 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 TTLL7Q6ZT98 887 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 JPH2Q9BR39 696 aaPredicted RBP12.45□□□□□ -0.42
FN1-211ENST00000443816 USP17L12C9JPN9 530 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 USP17L21D6R901 530 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 USPL1Q5W0Q7 1092 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 SKAP1Q86WV1 359 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 FAM227BQ96M60 508 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 DNAI1Q9UI46 699 aa12.45□□□□□ -0.42
FN1-211ENST00000443816 ACTN4O43707 911 aaKnown RBP12.44□□□□□ -0.42
FN1-211ENST00000443816 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 CABP7Q86V35 215 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 CSRNP1Q96S65 589 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 TEKT3Q9BXF9 490 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 ANO3Q9BYT9 981 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 RETREG2Q8NC44 543 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 SERPINB2P05120 415 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 GYG1P46976 350 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 SYCE1Q8N0S2 351 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 RNF169Q8NCN4 708 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 PRIMPOLQ96LW4 560 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 CFAP57Q96MR6 1250 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 DDX25Q9UHL0 483 aaKnown RBP12.44□□□□□ -0.42
FN1-211ENST00000443816 PPP1R9BQ96SB3 815 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 NRBP2Q9NSY0 501 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 PHKBQ93100 1093 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 TYW5A2RUC4 315 aaKnown RBP12.44□□□□□ -0.42
FN1-211ENST00000443816 IQCDQ96DY2 449 aa12.44□□□□□ -0.42
FN1-211ENST00000443816 ERVK-7P63135 1459 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 IQGAP3Q86VI3 1631 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 RIOK3O14730 519 aaKnown RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 CAPN9O14815 690 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 MUM1L1Q5H9M0 696 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 GPATCH4Q5T3I0 446 aaKnown RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 ZNF654Q8IZM8 581 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 USP17L3A6NCW0 530 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 USP17L4A6NCW7 530 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 N4BP1O75113 896 aaKnown RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 TTLL1O95922 423 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 TFDP1Q14186 410 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 ASPRV1Q53RT3 343 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 USP17L1Q7RTZ2 530 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 MKRN1Q9UHC7 482 aaKnown RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 PPP1R21Q6ZMI0 780 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 DIS3L2Q8IYB7 885 aaKnown RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 E7EWF7 191 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 BCAMP50895 628 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 CUL4BQ13620 913 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 MLKLQ8NB16 471 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 CAPZA3Q96KX2 299 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 BAG1Q99933 345 aaPredicted RBP12.43□□□□□ -0.42
FN1-211ENST00000443816 FAM184BQ9ULE4 1060 aa12.43□□□□□ -0.42
FN1-211ENST00000443816 CD19P15391 556 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms