RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CNNM2Q9H8M5 875 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
USP1-203ENST00000442679 B4E1Z4 1266 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L15C9J2P7 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L13C9JLJ4 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L11C9JVI0 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L18D6R9N7 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L22D6RA61 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L17D6RBQ6 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L19D6RCP7 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L20D6RJB6 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 E7EWF7 191 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 KDM4AO75164 1064 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 IRX3P78415 501 aaPredicted RBP14.55□□□□□ -0.08
USP1-203ENST00000442679 USP17L24Q0WX57 530 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 TRDNQ13061 729 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 NOM1Q5C9Z4 860 aaKnown RBP14.55□□□□□ -0.08
USP1-203ENST00000442679 SPICE1Q8N0Z3 855 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 SMCR8Q8TEV9 937 aaPredicted RBP14.55□□□□□ -0.08
USP1-203ENST00000442679 ZNF296Q8WUU4 475 aaPredicted RBP14.55□□□□□ -0.08
USP1-203ENST00000442679 LPAR1Q92633 364 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 P2RX7Q99572 595 aaKnown RBP14.55□□□□□ -0.08
USP1-203ENST00000442679 RNF39Q9H2S5 420 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 RPAP3Q9H6T3 665 aaPredicted RBP14.55□□□□□ -0.08
USP1-203ENST00000442679 PRDM10Q9NQV6 1147 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 TCP11L1Q9NUJ3 509 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 CPA4Q9UI42 421 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 STX8Q9UNK0 236 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 TAF6LQ9Y6J9 622 aa14.55□□□□□ -0.08
USP1-203ENST00000442679 F5H6K3 240 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 SLC27A2O14975 620 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 FKTNO75072 461 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 KLRC3Q07444 240 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 NECTIN1Q15223 517 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 CREB3L3Q68CJ9 461 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 C17orf99Q6UX52 265 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 CATSPERGQ6ZRH7 1159 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 LRRC47Q8N1G4 583 aaKnown RBP14.54□□□□□ -0.08
USP1-203ENST00000442679 ZSWIM5Q9P217 1185 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 SYNPO2Q9UMS6 1093 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 MYH8P13535 1937 aa14.54□□□□□ -0.08
USP1-203ENST00000442679 ADGRA2Q96PE1 1338 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 REC8O95072 547 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 NOVP48745 357 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 SP3Q02447 781 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 ZKSCAN3Q9BRR0 538 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 TANGO6Q9C0B7 1094 aa14.53□□□□□ -0.08
USP1-203ENST00000442679 LOC285556D6RIA3 1793 aa14.52□□□□□ -0.08
USP1-203ENST00000442679 WDR46O15213 610 aaKnown RBP14.52□□□□□ -0.09
USP1-203ENST00000442679 NDUFB10O96000 172 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 GCLCP48506 637 aaPredicted RBP14.52□□□□□ -0.09
USP1-203ENST00000442679 HERVK_113P62684 666 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 COG2Q14746 738 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 CCDC178Q5BJE1 867 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 RNF20Q5VTR2 975 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 SLFN13Q68D06 897 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 STOX1Q6ZVD7 989 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 RALYLQ86SE5 291 aaKnown RBP14.52□□□□□ -0.09
USP1-203ENST00000442679 GMCL1P1Q8NEA9 526 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 NCOA7Q8NI08 942 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 TTC14Q96N46 770 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 ZSCAN10Q96SZ4 725 aaPredicted RBP14.52□□□□□ -0.09
USP1-203ENST00000442679 TMEM47Q9BQJ4 181 aa14.52□□□□□ -0.09
USP1-203ENST00000442679 GREB1LQ9C091 1923 aaPredicted RBP14.52□□□□□ -0.09
USP1-203ENST00000442679 PTPRFP10586 1907 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 BCRP11274 1271 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 TOP1P11387 765 aaKnown RBP14.51□□□□□ -0.09
USP1-203ENST00000442679 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 RCSD1Q6JBY9 416 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 CYB5R4Q7L1T6 521 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 DGKHQ86XP1 1220 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 ANKRD13CQ8N6S4 541 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 CHMP4CQ96CF2 233 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 NUP88Q99567 741 aaPredicted RBP14.51□□□□□ -0.09
USP1-203ENST00000442679 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
USP1-203ENST00000442679 LAMA4Q16363 1823 aa14.5□□□□□ -0.09
USP1-203ENST00000442679 FLOT1O75955 427 aa14.5□□□□□ -0.09
USP1-203ENST00000442679 ZKSCAN1P17029 563 aaPredicted RBP14.5□□□□□ -0.09
USP1-203ENST00000442679 SAMD1Q6SPF0 538 aaPredicted RBP14.5□□□□□ -0.09
USP1-203ENST00000442679 CD99L2Q8TCZ2 262 aa14.5□□□□□ -0.09
USP1-203ENST00000442679 GTF3C2Q8WUA4 911 aaPredicted RBP14.5□□□□□ -0.09
USP1-203ENST00000442679 ERO1AQ96HE7 468 aa14.5□□□□□ -0.09
USP1-203ENST00000442679 RBPJLQ9UBG7 517 aa14.5□□□□□ -0.09
USP1-203ENST00000442679 MTMR7Q9Y216 660 aa14.5□□□□□ -0.09
USP1-203ENST00000442679 TNKSO95271 1327 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 BMP3P12645 472 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 MCCP23508 829 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 DSG3P32926 999 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 KIF22Q14807 665 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 CHST3Q7LGC8 479 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 MB21D2Q8IYB1 491 aaPredicted RBP14.49□□□□□ -0.09
USP1-203ENST00000442679 RASEFQ8IZ41 740 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 ENAHQ8N8S7 591 aaPredicted RBP14.49□□□□□ -0.09
USP1-203ENST00000442679 ANKS1AQ92625 1134 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 GMCL1Q96IK5 515 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 PAGR1Q9BTK6 254 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 FBXO28Q9NVF7 368 aa14.49□□□□□ -0.09
USP1-203ENST00000442679 ISY1Q9ULR0 285 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms