RNA–Protein interactions for RNA: ENST00000442572.1

CDCA4P3-201, Transcript of cell division cycle associated 4 pseudogene 3, humanhuman

BASIC

Gene CDCA4P3, Length 689 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P3-201ENST00000442572 HOXC10Q9NYD6 342 aa14.91□□□□□ -0.02
CDCA4P3-201ENST00000442572 COL11A1P12107 1806 aaPredicted RBP14.91□□□□□ -0.02
CDCA4P3-201ENST00000442572 MYPNQ86TC9 1320 aa14.91□□□□□ -0.02
CDCA4P3-201ENST00000442572 RAD50Q92878 1312 aa14.91□□□□□ -0.02
CDCA4P3-201ENST00000442572 PLXNB2O15031 1838 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 IGKV6D-41A0A0C4DH26 115 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 WDR46O15213 610 aaKnown RBP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 ORC4O43929 436 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 FGAP02671 866 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 NEFLP07196 543 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 FGRP09769 529 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 EEF2P13639 858 aaKnown RBP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 GSPT1P15170 499 aaKnown RBP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 GPRC5AQ8NFJ5 357 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 NEDD1Q8NHV4 660 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 COA7Q96BR5 231 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 ARMC5Q96C12 935 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 ARHGAP39Q9C0H5 1083 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 RPAP3Q9H6T3 665 aaPredicted RBP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 RABGAP1Q9Y3P9 1069 aa14.9□□□□□ -0.02
CDCA4P3-201ENST00000442572 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 CTGFP29279 349 aa14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 COG2Q14746 738 aa14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 CWC27Q6UX04 472 aaKnown RBP14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 MKL1Q969V6 931 aa14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 DSCC1Q9BVC3 393 aa14.89□□□□□ -0.03
CDCA4P3-201ENST00000442572 TNPO2O14787 897 aaKnown RBP14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 CAPN15O75808 1086 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 TTLL1O95922 423 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 CENPBP07199 599 aaPredicted RBP14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 MAPK4P31152 587 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 ERVK-9P63128 1117 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 ERVK-24P63145 666 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 CCNA1P78396 465 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 IRF5Q13568 498 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 SLC9C1Q4G0N8 1177 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 MB21D1Q8N884 522 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 MTMR4Q9NYA4 1195 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 RBPJLQ9UBG7 517 aa14.88□□□□□ -0.03
CDCA4P3-201ENST00000442572 SPDYE16A6NNV3 312 aaPredicted RBP14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 PRDM1O75626 825 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 RGS19P49795 217 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 TFAP4Q01664 338 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 ATP2B2Q01814 1243 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 ERICH6BQ5W0A0 696 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 CLEC10AQ8IUN9 316 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 STK11IPQ8N1F8 1099 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 RAET1EQ8TD07 263 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 PXYLP1Q8TE99 480 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 CEP95Q96GE4 821 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 TANGO6Q9C0B7 1094 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 RNF41Q9H4P4 317 aaPredicted RBP14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 CTNNA3Q9UI47 895 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 PTCH2Q9Y6C5 1203 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 ZNFX1Q9P2E3 1918 aaKnown RBP14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 ZNF236Q9UL36 1845 aa14.87□□□□□ -0.03
CDCA4P3-201ENST00000442572 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 DSG3P32926 999 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 CTDSPL2Q05D32 466 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 SLAIN1Q8ND83 568 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 GMCL1P1Q8NEA9 526 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 CCDC136Q96JN2 1154 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 TXNRD2Q9NNW7 524 aa14.86□□□□□ -0.03
CDCA4P3-201ENST00000442572 F5H6K3 240 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 ZNF213O14771 459 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 FLOT1O75955 427 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 CHMLP26374 656 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 GRK4P32298 578 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 PRKCZQ05513 592 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 KLRC3Q07444 240 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 KIAA1755Q5JYT7 1200 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 AKNAD1Q5T1N1 836 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 MFSD6Q6ZSS7 791 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 CCAR1Q8IX12 1150 aaKnown RBP14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 STAG1Q8WVM7 1258 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 SOCS4Q8WXH5 440 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 ZNF333Q96JL9 665 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 TCP11L1Q9NUJ3 509 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 CLIP2Q9UDT6 1046 aa14.85□□□□□ -0.03
CDCA4P3-201ENST00000442572 KIAA0100Q14667 2235 aaKnown RBP14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 RANBP6O60518 1105 aaKnown RBP14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 CAPN2P17655 700 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 NOVP48745 357 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 FLT3LGP49771 235 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 BMP2KLQ5H9B9 411 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 FAM47AQ5JRC9 791 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 SPICE1Q8N0Z3 855 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 SHCBP1Q8NEM2 672 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 PAGR1Q9BTK6 254 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 ADAMTS5Q9UNA0 930 aa14.84□□□□□ -0.03
CDCA4P3-201ENST00000442572 CNMDO75829 334 aa14.83□□□□□ -0.04
CDCA4P3-201ENST00000442572 FDX1P10109 184 aa14.83□□□□□ -0.04
CDCA4P3-201ENST00000442572 XRCC5P13010 732 aaKnown RBP14.83□□□□□ -0.04
CDCA4P3-201ENST00000442572 UBXN2AP68543 259 aa14.83□□□□□ -0.04
CDCA4P3-201ENST00000442572 IMMTQ16891 758 aaKnown RBP14.83□□□□□ -0.04
CDCA4P3-201ENST00000442572 Q3C1V9 767 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms