RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ATP2B2Q01814 1243 aa14.14□□□□□ -0.15
TTC28-203ENST00000442232 CACNB2Q08289 660 aaPredicted RBP14.14□□□□□ -0.15
TTC28-203ENST00000442232 LRRFIP1Q32MZ4 808 aaKnown RBP14.14□□□□□ -0.15
TTC28-203ENST00000442232 MAP3K21Q5TCX8 1036 aa14.14□□□□□ -0.15
TTC28-203ENST00000442232 MB21D1Q8N884 522 aa14.14□□□□□ -0.15
TTC28-203ENST00000442232 DIS3LQ8TF46 1054 aaKnown RBP14.14□□□□□ -0.15
TTC28-203ENST00000442232 USP6NLQ92738 828 aa14.14□□□□□ -0.15
TTC28-203ENST00000442232 ZNF236Q9UL36 1845 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 USP17L12C9JPN9 530 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 USP17L21D6R901 530 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 FLOT1O75955 427 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 AKR1B1P15121 316 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 PTPREP23469 700 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 CDK8P49336 464 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 EVX2Q03828 476 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 PLS1Q14651 629 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 CCL14Q16627 93 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 SLFNL1Q499Z3 407 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 C12orf60Q5U649 245 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 SAMD1Q6SPF0 538 aaPredicted RBP14.13□□□□□ -0.15
TTC28-203ENST00000442232 C16orf86Q6ZW13 317 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 C7orf61Q8IZ16 206 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 SLC5A4Q9NY91 659 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 BTBD7Q9P203 1132 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 OGDHLQ9ULD0 1010 aa14.13□□□□□ -0.15
TTC28-203ENST00000442232 A0A1W2PRG0 241 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 RAD21O60216 631 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 GRB14Q14449 540 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 DPP9Q86TI2 863 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 KBTBD3Q8NAB2 608 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 DCTPP1Q9H773 170 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 VCPKMTQ9H867 229 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 GOPCQ9HD26 462 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 RBM27Q9P2N5 1060 aaKnown RBP14.12□□□□□ -0.15
TTC28-203ENST00000442232 ZBTB47Q9UFB7 747 aaPredicted RBP14.12□□□□□ -0.15
TTC28-203ENST00000442232 TMX2Q9Y320 296 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 PARP14Q460N5 1801 aa14.12□□□□□ -0.15
TTC28-203ENST00000442232 RLFQ13129 1914 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 CYP2D7A0A087X1C5 515 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 A0A1W2PPC1 479 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 ERC2O15083 957 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 WDR46O15213 610 aaKnown RBP14.11□□□□□ -0.15
TTC28-203ENST00000442232 MSCO60682 206 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 ZFYP08048 801 aaPredicted RBP14.11□□□□□ -0.15
TTC28-203ENST00000442232 CNGA1P29973 690 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 CCND3P30281 292 aaPredicted RBP14.11□□□□□ -0.15
TTC28-203ENST00000442232 DSG3P32926 999 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 SPICE1Q8N0Z3 855 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 SHCBP1Q8NEM2 672 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 MOV10L1Q9BXT6 1211 aaKnown RBP14.11□□□□□ -0.15
TTC28-203ENST00000442232 SPATC1LQ9H0A9 340 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 PUS7LQ9H0K6 701 aaKnown RBP14.11□□□□□ -0.15
TTC28-203ENST00000442232 KANSL2Q9H9L4 492 aa14.11□□□□□ -0.15
TTC28-203ENST00000442232 COL11A1P12107 1806 aaPredicted RBP14.11□□□□□ -0.15
TTC28-203ENST00000442232 STRNO43815 780 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 GNAT2P19087 354 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 TDO2P48775 406 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 GIMAP6Q6P9H5 292 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 CTR9Q6PD62 1173 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 NCAPG2Q86XI2 1143 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 CLEC10AQ8IUN9 316 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 APPBP2Q92624 585 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 MROH8Q9H579 483 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 MKNK2Q9HBH9 465 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 ZNF287Q9HBT7 754 aa14.1□□□□□ -0.15
TTC28-203ENST00000442232 MYH4Q9Y623 1939 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 MINDY4BA8MYZ0 360 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 RNF113AO15541 343 aaKnown RBP14.09□□□□□ -0.15
TTC28-203ENST00000442232 CHGBP05060 677 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 APPP05067 770 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 HOXC6P09630 235 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 EEF2P13639 858 aaKnown RBP14.09□□□□□ -0.15
TTC28-203ENST00000442232 ERCC3P19447 782 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 ADORA2AP29274 412 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 ATG4CQ96DT6 458 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 STRBPQ96SI9 672 aaKnown RBP14.09□□□□□ -0.15
TTC28-203ENST00000442232 ZMYND8Q9ULU4 1186 aaPredicted RBP14.09□□□□□ -0.15
TTC28-203ENST00000442232 TTC41PQ6P2S7 1318 aa14.09□□□□□ -0.15
TTC28-203ENST00000442232 GREB1LQ9C091 1923 aaPredicted RBP14.08□□□□□ -0.16
TTC28-203ENST00000442232 ZNFX1Q9P2E3 1918 aaKnown RBP14.08□□□□□ -0.16
TTC28-203ENST00000442232 SLC25A27O95847 323 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 SBK1Q52WX2 424 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 TSHZ3Q63HK5 1081 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 OLFML2BQ68BL8 750 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 NPLOC4Q8TAT6 608 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 NACAP1Q9BZK3 213 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 FLRT1Q9NZU1 646 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 DDX20Q9UHI6 824 aaKnown RBP14.08□□□□□ -0.16
TTC28-203ENST00000442232 PLXNA1Q9UIW2 1896 aa14.08□□□□□ -0.16
TTC28-203ENST00000442232 GPAA1O43292 621 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 FCER1AP12319 257 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 CYP2C19P33261 490 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 COPB2P35606 906 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 LHX8Q68G74 356 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 ABRAQ8N0Z2 381 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 STK11IPQ8N1F8 1099 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 FSD1Q9BTV5 496 aa14.07□□□□□ -0.16
TTC28-203ENST00000442232 STAP2Q9UGK3 403 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms