RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 CCDC129Q6ZRS4 1044 aa8.54□□□□□ -1.04
CDC42BPA-208ENST00000442054 PDHXO00330 501 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 DTNBO60941 627 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 CHGBP05060 677 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 CST9Q5W186 159 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 NSMFQ6X4W1 530 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 GMLQ99445 158 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 KANSL2Q9H9L4 492 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 SLX4Q8IY92 1834 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 DDTLA6NHG4 134 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 RPS6KB1P23443 525 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 ADD2P35612 726 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 PPATQ06203 517 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 SEPT2Q15019 361 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 FAM47AQ5JRC9 791 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 ANKRD13CQ8N6S4 541 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 SMARCC2Q8TAQ2 1214 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZSCAN31Q96LW9 406 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 MRVI1Q9Y6F6 885 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 BCORQ6W2J9 1755 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 MYH3P11055 1940 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 CYP2D7A0A087X1C5 515 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 CYP2B6P20813 491 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 PSMC4P43686 418 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 HOMER1Q86YM7 354 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 ANKRD35Q8N283 1001 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 FBXL16Q8N461 479 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 MYRIPQ8NFW9 859 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 CTCFLQ8NI51 663 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 KIAA1524Q8TCG1 905 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 PGBD1Q96JS3 809 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 SPC25Q9HBM1 224 aa8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.53□□□□□ -1.04
CDC42BPA-208ENST00000442054 PATL2C9JE40 543 aaKnown RBP8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 GPR25O00155 361 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 CXCL11O14625 94 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 USP2O75604 605 aaPredicted RBP8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 ZBTB48P10074 688 aaPredicted RBP8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 TMEM179Q6ZVK1 233 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 VGLL2Q8N8G2 317 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 RNF214Q8ND24 703 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 MRIQ9BWK5 157 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 GPCPD1Q9NPB8 672 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 PDRG1Q9NUG6 133 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 PRKAG2Q9UGJ0 569 aa8.52□□□□□ -1.04
CDC42BPA-208ENST00000442054 FLT1P17948 1338 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 RASSF10A6NK89 507 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 B4DLN1 442 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 DYNC1I1O14576 645 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 LETM1O95202 739 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 CTDNEP1O95476 244 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 NCLP19338 710 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 MRPL12P52815 198 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 RESTQ13127 1097 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 STOX1Q6ZVD7 989 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 PLA2G4DQ86XP0 818 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 CCDC83Q8IWF9 413 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 CCDC82Q8N4S0 544 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 HOXC10Q9NYD6 342 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 C19orf81C9J6K1 198 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 FOXN1O15353 648 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 ADCY5O95622 1261 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 LIG1P18858 919 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 HSP90AA2PQ14568 343 aaPredicted RBP8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 SASS6Q6UVJ0 657 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 IFNL3Q8IZI9 196 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 LRRC47Q8N1G4 583 aaKnown RBP8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 SLC44A5Q8NCS7 719 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 CHURC1Q8WUH1 139 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 DPF3Q92784 378 aa8.52□□□□□ -1.05
CDC42BPA-208ENST00000442054 CYP2C8P10632 490 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CYP2D6P10635 497 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CTU1Q7Z7A3 348 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 JAKMIP1Q96N16 626 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 SEC62Q99442 399 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 RNF186Q9NXI6 227 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 SEC63Q9UGP8 760 aaKnown RBP8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 PRDM4Q9UKN5 801 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CAP2P40123 477 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CDK8P49336 464 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CTDSPL2Q05D32 466 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 PPIL2Q13356 520 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 TICAM2Q86XR7 235 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZFPM1Q8IX07 1006 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 CD99L2Q8TCZ2 262 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZKSCAN3Q9BRR0 538 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 USP25Q9UHP3 1055 aa8.51□□□□□ -1.05
CDC42BPA-208ENST00000442054 ZBTB21Q9ULJ3 1066 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms