RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 SMYD4Q8IYR2 804 aaPredicted RBP18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 CTCFLQ8NI51 663 aaPredicted RBP18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 CPLX3Q8WVH0 158 aa18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 BAZ2AQ9UIF9 1905 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 PPP1R3GB7ZBB8 358 aa18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 IQUBQ8NA54 791 aa18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 TNFRSF25Q93038 417 aa18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 MRPL44Q9H9J2 332 aaKnown RBP18.72■□□□□ 0.59
SEMA3B-207ENST00000441915 ATP8B1O43520 1251 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 PBX1P40424 430 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 CTR9Q6PD62 1173 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 CREBRFQ8IUR6 639 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 CACNA1SQ13698 1873 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 CICQ96RK0 1608 aaPredicted RBP18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 USP17L12C9JPN9 530 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 USP17L21D6R901 530 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 NPY5RQ15761 445 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 TEX35Q5T0J7 233 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 ACSBG1Q96GR2 724 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 PYM1Q9BRP8 204 aaKnown RBP18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 ADGRG1Q9Y653 693 aa18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 COL1A1P02452 1464 aaPredicted RBP18.71■□□□□ 0.59
SEMA3B-207ENST00000441915 CNTNAP5Q8WYK1 1306 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 PLA2G4AP47712 749 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 CNGA4Q8IV77 575 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 LZTFL1Q9NQ48 299 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 BSDC1Q9NW68 430 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 LAMB2P55268 1798 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 VGLL3A8MV65 326 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 MFAP3LO75121 409 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 ITPK1Q13572 414 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 NOM1Q5C9Z4 860 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 RAD9BQ6WBX8 426 aa18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 RSRC2Q7L4I2 434 aaKnown RBP18.7■□□□□ 0.58
SEMA3B-207ENST00000441915 WTIPA6NIX2 430 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 TRAPPC10P48553 1259 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 DDB1Q16531 1140 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 RABGGTAQ92696 567 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 STAMQ92783 540 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 GOLGA1Q92805 767 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 CDCA7Q9BWT1 371 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 IRX2Q9BZI1 471 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 EPC1Q9H2F5 836 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 KIF5CO60282 957 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 CASP14P31944 242 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 NLRP5P59047 1200 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 PIK3AP1Q6ZUJ8 805 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 SRBD1Q8N5C6 995 aaKnown RBP18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 FAM84BQ96KN1 310 aaPredicted RBP18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 CTNND2Q9UQB3 1225 aa18.69■□□□□ 0.58
SEMA3B-207ENST00000441915 CCDC51Q96ER9 411 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 MINPP1Q9UNW1 487 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 XDHP47989 1333 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 ITIH6Q6UXX5 1313 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 STRCQ7RTU9 1775 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 ZBTB22O15209 634 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 SEC31AO94979 1220 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 SCG2P13521 617 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 E2F4Q16254 413 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 ZNF384Q8TF68 577 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 BLZF1Q9H2G9 400 aa18.68■□□□□ 0.58
SEMA3B-207ENST00000441915 ORC4O43929 436 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 SF3B3Q15393 1217 aaKnown RBP18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 RRAGBQ5VZM2 374 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 CC2D1AQ6P1N0 951 aaPredicted RBP18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 RASGRP2Q7LDG7 609 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 NSUN4Q96CB9 384 aaKnown RBP18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 COL4A1P02462 1669 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 MYH14Q7Z406 1995 aaKnown RBP18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 GYPCP04921 128 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 ERFEQ4G0M1 354 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 CLEC4GQ6UXB4 293 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 ANKRD20A12PQ8NF67 263 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 ARFGAP3Q9NP61 516 aa18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 BAZ2BQ9UIF8 2168 aaKnown RBP18.67■□□□□ 0.58
SEMA3B-207ENST00000441915 N4BP3O15049 544 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 MCM7P33993 719 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 CCT6AP40227 531 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 SPAG1Q07617 926 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 PARD6BQ9BYG5 372 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 CRNKL1Q9BZJ0 848 aaKnown RBP18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 DLEC1Q9Y238 1755 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 LRRC10BA6NIK2 292 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 GTPBP6O43824 516 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 NMT2O60551 498 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 PFKFB3Q16875 520 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 FAM47AQ5JRC9 791 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 JAKMIP3Q5VZ66 844 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 DCP1AQ9NPI6 582 aaPredicted RBP18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 RWDD2AQ9UIY3 292 aa18.66■□□□□ 0.58
SEMA3B-207ENST00000441915 CCDC66A2RUB6 948 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 FXR1P51114 621 aaKnown RBP eCLIP18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 PAK1Q13153 545 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 KRT31Q15323 416 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 PDXDC2PQ6P474 469 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 LIMA1Q9UHB6 759 aaKnown RBP18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 TXLNAP40222 546 aa18.65■□□□□ 0.58
SEMA3B-207ENST00000441915 MECOMQ03112 1051 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms