RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 XAGE3Q8WTP9 111 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 PLIN2Q99541 437 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 TRIM6Q9C030 488 aaPredicted RBP8.44□□□□□ -1.06
HDAC9-214ENST00000441542 ABHD10Q9NUJ1 306 aa8.44□□□□□ -1.06
HDAC9-214ENST00000441542 A0A1B0GTH6 734 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 B4E1Z4 1266 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 EZRP15311 586 aaKnown RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 PLCD1P51178 756 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 NAA35Q5VZE5 725 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 LMBR1LQ6UX01 489 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 COPS6Q7L5N1 327 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 KRT26Q7Z3Y9 468 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 PNMA8AQ86V59 439 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 TMTC1Q8IUR5 882 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 THEMISQ8N1K5 641 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 LINS1Q8NG48 757 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 LACRTQ9GZZ8 138 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 CSRNP2Q9H175 543 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 VPS54Q9P1Q0 977 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 HPSEQ9Y251 543 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 EME2A4GXA9 379 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 ZNF213O14771 459 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 NDUFA10O95299 355 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 DDX58O95786 925 aaKnown RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 FGAP02671 866 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 IGKV5-2P06315 115 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 GUCY1A2P33402 732 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 AARSP49588 968 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 PTPAQ15257 358 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 KRT31Q15323 416 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 SAFBQ15424 915 aaKnown RBP eCLIP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 CFAP58Q5T655 872 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 DIS3L2Q8IYB7 885 aaKnown RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 KIF9Q9HAQ2 790 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 DDX20Q9UHI6 824 aaKnown RBP8.43□□□□□ -1.06
HDAC9-214ENST00000441542 ALKQ9UM73 1620 aa8.43□□□□□ -1.06
HDAC9-214ENST00000441542 A0A087WZG4 1122 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 OPA1O60313 960 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 DPYDQ12882 1025 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 SNCBQ16143 134 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 SPRED3Q2MJR0 410 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ACCSLQ4AC99 568 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 WDR93Q6P2C0 686 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 OR2W6PQ8NHA6 318 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MICAL1Q8TDZ2 1067 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ZNF473Q8WTR7 871 aaKnown RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ZBTB10Q96DT7 871 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MLXIPQ9HAP2 919 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ADD3Q9UEY8 706 aaKnown RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MCM8Q9UJA3 840 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 LSP1P33241 339 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ANTXR2P58335 489 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 AMPD2Q01433 879 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MYO1EQ12965 1108 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 HLTFQ14527 1009 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 NFRKBQ6P4R8 1299 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MAEAQ7L5Y9 396 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ABTB2Q8N961 1025 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 TCP11Q8WWU5 503 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ZIM3Q96PE6 472 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 TSPAN18Q96SJ8 248 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 HAUS7Q99871 368 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 UBAC1Q9BSL1 405 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 NFU1Q9UMS0 254 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 REXO2Q9Y3B8 237 aaKnown RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 METP08581 1390 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ZMYM6O95789 1325 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ZC3H4Q9UPT8 1303 aaKnown RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 IFT172Q9UG01 1749 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MED1Q15648 1581 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 TRIM49BA6NDI0 452 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 RCCD1A6NED2 376 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 GCFC2P16383 781 aaKnown RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MCM3P25205 808 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 FNTAP49354 379 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 KLK7P49862 253 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MORC3Q14149 939 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 SPATA1Q5VX52 437 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 NBPF10Q6P3W6 841 aaKnown RBP8.42□□□□□ -1.06
HDAC9-214ENST00000441542 MICALCLQ6ZW33 695 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 TRAPPC11Q7Z392 1133 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 ANKLE2Q86XL3 938 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 TEX11Q8IYF3 940 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 SDR16C5Q8N3Y7 309 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 NCOA7Q8NI08 942 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 OXER1Q8TDS5 423 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 SPDL1Q96EA4 605 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 FAM184BQ9ULE4 1060 aa8.42□□□□□ -1.06
HDAC9-214ENST00000441542 A0A1B0GUA9 196 aa8.41□□□□□ -1.06
HDAC9-214ENST00000441542 TTC26A0AVF1 554 aa8.41□□□□□ -1.06
HDAC9-214ENST00000441542 PPP1R12AO14974 1030 aaPredicted RBP8.41□□□□□ -1.06
HDAC9-214ENST00000441542 NPM3O75607 178 aaKnown RBP8.41□□□□□ -1.06
HDAC9-214ENST00000441542 AP1G2O75843 785 aa8.41□□□□□ -1.06
HDAC9-214ENST00000441542 CLTAP09496 248 aa8.41□□□□□ -1.06
HDAC9-214ENST00000441542 TMOD1P28289 359 aa8.41□□□□□ -1.06
HDAC9-214ENST00000441542 CKAP4Q07065 602 aaKnown RBP8.41□□□□□ -1.06
HDAC9-214ENST00000441542 ARMCX6Q7L4S7 300 aa8.41□□□□□ -1.06
HDAC9-214ENST00000441542 FAXDC2Q96IV6 333 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms