RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 POLR3DP05423 398 aaPredicted RBP25.06■■□□□ 1.6
TRIM39-210ENST00000440271 C9orf50Q5SZB4 431 aa25.06■■□□□ 1.6
TRIM39-210ENST00000440271 ZKSCAN2Q63HK3 967 aa25.06■■□□□ 1.6
TRIM39-210ENST00000440271 RIOK1Q9BRS2 568 aaKnown RBP25.06■■□□□ 1.6
TRIM39-210ENST00000440271 SPATC1LQ9H0A9 340 aa25.06■■□□□ 1.6
TRIM39-210ENST00000440271 SEMA6BQ9H3T3 888 aa25.06■■□□□ 1.6
TRIM39-210ENST00000440271 PRDM5Q9NQX1 630 aaPredicted RBP25.06■■□□□ 1.6
TRIM39-210ENST00000440271 SEPT4O43236 478 aa25.05■■□□□ 1.6
TRIM39-210ENST00000440271 COBLO75128 1261 aa25.05■■□□□ 1.6
TRIM39-210ENST00000440271 ERCC3P19447 782 aa25.05■■□□□ 1.6
TRIM39-210ENST00000440271 GABPAQ06546 454 aa25.05■■□□□ 1.6
TRIM39-210ENST00000440271 SHCBP1Q8NEM2 672 aa25.05■■□□□ 1.6
TRIM39-210ENST00000440271 BADQ92934 168 aa25.05■■□□□ 1.6
TRIM39-210ENST00000440271 MYCNP04198 464 aaPredicted RBP25.04■■□□□ 1.6
TRIM39-210ENST00000440271 SNX17Q15036 470 aa25.04■■□□□ 1.6
TRIM39-210ENST00000440271 TRIM60Q495X7 471 aa25.04■■□□□ 1.6
TRIM39-210ENST00000440271 TANGO6Q9C0B7 1094 aa25.04■■□□□ 1.6
TRIM39-210ENST00000440271 LTBP2Q14767 1821 aa25.04■■□□□ 1.6
TRIM39-210ENST00000440271 RLFQ13129 1914 aa25.04■■□□□ 1.6
TRIM39-210ENST00000440271 MPHOSPH10O00566 681 aaKnown RBP25.03■■□□□ 1.6
TRIM39-210ENST00000440271 ADCYAP1R1P41586 468 aa25.03■■□□□ 1.6
TRIM39-210ENST00000440271 PRAMEF19Q5SWL8 479 aa25.03■■□□□ 1.6
TRIM39-210ENST00000440271 SLC5A4Q9NY91 659 aa25.03■■□□□ 1.6
TRIM39-210ENST00000440271 MAGEB6P1A0A0J9YX57 407 aa25.02■■□□□ 1.6
TRIM39-210ENST00000440271 EVX2Q03828 476 aa25.02■■□□□ 1.6
TRIM39-210ENST00000440271 PDLIM7Q9NR12 457 aa25.02■■□□□ 1.6
TRIM39-210ENST00000440271 TRIM43BA6NCK2 446 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 SMAD3P84022 425 aaKnown RBP25.01■■□□□ 1.59
TRIM39-210ENST00000440271 LRRC41Q15345 812 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 KIAA1755Q5JYT7 1200 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 C1orf53Q5VUE5 145 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 SH3RF1Q7Z6J0 888 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 MB21D1Q8N884 522 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 MAFAQ8NHW3 353 aaPredicted RBP25.01■■□□□ 1.59
TRIM39-210ENST00000440271 FERMT2Q96AC1 680 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 TRIM43Q96BQ3 446 aaPredicted RBP25.01■■□□□ 1.59
TRIM39-210ENST00000440271 MROH8Q9H579 483 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 MCM9Q9NXL9 1143 aa25.01■■□□□ 1.59
TRIM39-210ENST00000440271 ZNF236Q9UL36 1845 aa25■■□□□ 1.59
TRIM39-210ENST00000440271 DSG3P32926 999 aa25■■□□□ 1.59
TRIM39-210ENST00000440271 PLS1Q14651 629 aa25■■□□□ 1.59
TRIM39-210ENST00000440271 NCAPG2Q86XI2 1143 aa25■■□□□ 1.59
TRIM39-210ENST00000440271 ABRAQ8N0Z2 381 aa25■■□□□ 1.59
TRIM39-210ENST00000440271 CRNKL1Q9BZJ0 848 aaKnown RBP25■■□□□ 1.59
TRIM39-210ENST00000440271 AACSQ86V21 672 aa24.99■■□□□ 1.59
TRIM39-210ENST00000440271 MAML3Q96JK9 1138 aa24.99■■□□□ 1.59
TRIM39-210ENST00000440271 TTYH1Q9H313 450 aaPredicted RBP24.99■■□□□ 1.59
TRIM39-210ENST00000440271 FAM47AQ5JRC9 791 aa24.98■■□□□ 1.59
TRIM39-210ENST00000440271 SLC9C2Q5TAH2 1124 aa24.98■■□□□ 1.59
TRIM39-210ENST00000440271 TMEM179Q6ZVK1 233 aa24.98■■□□□ 1.59
TRIM39-210ENST00000440271 MYLIPQ8WY64 445 aa24.98■■□□□ 1.59
TRIM39-210ENST00000440271 FLOT1O75955 427 aa24.97■■□□□ 1.59
TRIM39-210ENST00000440271 TLE2Q04725 743 aa24.97■■□□□ 1.59
TRIM39-210ENST00000440271 TTF1Q15361 905 aaPredicted RBP24.97■■□□□ 1.59
TRIM39-210ENST00000440271 SIAH1Q8IUQ4 282 aa24.97■■□□□ 1.59
TRIM39-210ENST00000440271 ATG4CQ96DT6 458 aa24.97■■□□□ 1.59
TRIM39-210ENST00000440271 FCER1AP12319 257 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 PDE6AP16499 860 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 ITPRIPQ8IWB1 547 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 SPICE1Q8N0Z3 855 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 SLC44A5Q8NCS7 719 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 SDR42E1Q8WUS8 393 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 DCP1AQ9NPI6 582 aaPredicted RBP24.96■■□□□ 1.59
TRIM39-210ENST00000440271 PHF24Q9UPV7 400 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 TACC3Q9Y6A5 838 aa24.96■■□□□ 1.59
TRIM39-210ENST00000440271 CYP2D6P10635 497 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 ITGB8P26012 769 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 ERC1Q8IUD2 1116 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 FTSJ3Q8IY81 847 aaKnown RBP24.95■■□□□ 1.58
TRIM39-210ENST00000440271 EXOC6BQ9Y2D4 811 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 TMX2Q9Y320 296 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 EYSQ5T1H1 3165 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 A0A0G2JMZ2 1700 aa24.95■■□□□ 1.58
TRIM39-210ENST00000440271 CEP85Q6P2H3 762 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 DYNLL2Q96FJ2 89 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 ARHGEF10LQ9HCE6 1279 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 XPNPEP3Q9NQH7 507 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 SWAP70Q9UH65 585 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 NRBP1Q9UHY1 535 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 VCANP13611 3396 aa24.94■■□□□ 1.58
TRIM39-210ENST00000440271 ZNF532Q9HCE3 1301 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 CCER2I3L3R5 266 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 RARBP10826 455 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 RLBP1P12271 317 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 FOSL2P15408 326 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 TMEM132BQ14DG7 1078 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 SAMD1Q6SPF0 538 aaPredicted RBP24.93■■□□□ 1.58
TRIM39-210ENST00000440271 CLEC10AQ8IUN9 316 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 LCORLQ8N3X6 602 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 VCPKMTQ9H867 229 aa24.93■■□□□ 1.58
TRIM39-210ENST00000440271 NAV1Q8NEY1 1877 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 TCRBV5S4A2TA0A5A2 114 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 SLC25A27O95847 323 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 CLTBP09497 229 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 AKR1B1P15121 316 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 EPHB4P54760 987 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 ICA1Q05084 483 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 RNPC3Q96LT9 517 aaKnown RBP24.92■■□□□ 1.58
TRIM39-210ENST00000440271 SH2D4AQ9H788 454 aa24.92■■□□□ 1.58
TRIM39-210ENST00000440271 IL1RAPL2Q9NP60 686 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms