RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 IMMTQ16891 758 aaKnown RBP12.4□□□□□ -0.42
UBE2F-213ENST00000439780 PIAS4Q8N2W9 510 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-213ENST00000439780 MKL1Q969V6 931 aa12.4□□□□□ -0.42
UBE2F-213ENST00000439780 ARHGAP39Q9C0H5 1083 aa12.4□□□□□ -0.42
UBE2F-213ENST00000439780 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-213ENST00000439780 RBM8AQ9Y5S9 174 aaKnown RBP12.4□□□□□ -0.42
UBE2F-213ENST00000439780 U3KPZ7 1027 aaPredicted RBP12.4□□□□□ -0.42
UBE2F-213ENST00000439780 ZSWIM8A7E2V4 1837 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L15C9J2P7 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L13C9JLJ4 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L11C9JVI0 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L18D6R9N7 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L22D6RA61 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L17D6RBQ6 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L19D6RCP7 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L20D6RJB6 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 NOVP48745 357 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 HERVK_113P62684 666 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-213ENST00000439780 USP17L24Q0WX57 530 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 PABPC4Q13310 644 aaKnown RBP eCLIP12.39□□□□□ -0.43
UBE2F-213ENST00000439780 ANKRD13CQ8N6S4 541 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 SMCR8Q8TEV9 937 aaPredicted RBP12.39□□□□□ -0.43
UBE2F-213ENST00000439780 SH2D4AQ9H788 454 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 TXNRD2Q9NNW7 524 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 RBPJLQ9UBG7 517 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 PNMA3Q9UL41 463 aa12.39□□□□□ -0.43
UBE2F-213ENST00000439780 B4E1Z4 1266 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 F5H6K3 240 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 TTLL1O95922 423 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 NDUFB10O96000 172 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 PCP11498 1178 aaKnown RBP12.38□□□□□ -0.43
UBE2F-213ENST00000439780 LACTBP83111 547 aaPredicted RBP12.38□□□□□ -0.43
UBE2F-213ENST00000439780 KLRC3Q07444 240 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 RCSD1Q6JBY9 416 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 STOX1Q6ZVD7 989 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 CTU1Q7Z7A3 348 aaKnown RBP12.38□□□□□ -0.43
UBE2F-213ENST00000439780 LRRC47Q8N1G4 583 aaKnown RBP12.38□□□□□ -0.43
UBE2F-213ENST00000439780 LPAR1Q92633 364 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 NUP88Q99567 741 aaPredicted RBP12.38□□□□□ -0.43
UBE2F-213ENST00000439780 RNF41Q9H4P4 317 aaPredicted RBP12.38□□□□□ -0.43
UBE2F-213ENST00000439780 TCP11L1Q9NUJ3 509 aa12.38□□□□□ -0.43
UBE2F-213ENST00000439780 RLFQ13129 1914 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 RAD21O60216 631 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 KDM4AO75164 1064 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 CNMDO75829 334 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
UBE2F-213ENST00000439780 COL9A3Q14050 684 aaPredicted RBP12.37□□□□□ -0.43
UBE2F-213ENST00000439780 NECTIN1Q15223 517 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 Q3C1V9 767 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 KIAA1211Q6ZU35 1233 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 OTOP1Q7RTM1 612 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 ESR2Q92731 530 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 CHMP4CQ96CF2 233 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 TRIM47Q96LD4 638 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 ZKSCAN3Q9BRR0 538 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 TANGO6Q9C0B7 1094 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 MCOLN1Q9GZU1 580 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 GOPCQ9HD26 462 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 FBXO28Q9NVF7 368 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 ZSWIM5Q9P217 1185 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 MORF4L1Q9UBU8 362 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 STX8Q9UNK0 236 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 MYH4Q9Y623 1939 aa12.37□□□□□ -0.43
UBE2F-213ENST00000439780 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
UBE2F-213ENST00000439780 E7EWF7 191 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 SLC27A2O14975 620 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 WDR46O15213 610 aaKnown RBP12.36□□□□□ -0.43
UBE2F-213ENST00000439780 PSMC4P43686 418 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 COG2Q14746 738 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 FAM110CQ1W6H9 321 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 RASGRP2Q7LDG7 609 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 TNS4Q8IZW8 715 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 GMCL1P1Q8NEA9 526 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 BTBD7Q9P203 1132 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 TRIM17Q9Y577 477 aa12.36□□□□□ -0.43
UBE2F-213ENST00000439780 HTTP42858 3142 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 DSG3P32926 999 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 CREB3L3Q68CJ9 461 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 SLFN13Q68D06 897 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 CASC1Q6TDU7 716 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 LBX2Q6XYB7 198 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 ATG4CQ96DT6 458 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 PAGR1Q9BTK6 254 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 KRT23Q9C075 422 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 CNNM2Q9H8M5 875 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 SYNPO2Q9UMS6 1093 aa12.35□□□□□ -0.43
UBE2F-213ENST00000439780 FLOT1O75955 427 aa12.34□□□□□ -0.43
UBE2F-213ENST00000439780 MCCP23508 829 aa12.34□□□□□ -0.43
UBE2F-213ENST00000439780 ERVK-9P63128 1117 aa12.34□□□□□ -0.43
UBE2F-213ENST00000439780 ERVK-24P63145 666 aa12.34□□□□□ -0.43
UBE2F-213ENST00000439780 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
UBE2F-213ENST00000439780 ENAHQ8N8S7 591 aaPredicted RBP12.34□□□□□ -0.43
UBE2F-213ENST00000439780 GPRC5AQ8NFJ5 357 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms