RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 WDR66Q8TBY9 1149 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 MORC2Q9Y6X9 1032 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-214ENST00000439122 IRS2Q9Y4H2 1338 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 KCNJ6P48051 423 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 GRAPQ13588 217 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 NAA30Q147X3 362 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-214ENST00000439122 PFKFB3Q16875 520 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-214ENST00000439122 PPP4R3BQ5MIZ7 849 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 GRAPLQ8TC17 118 aaPredicted RBP13.82□□□□□ -0.2
HDAC8-214ENST00000439122 DYNLL2Q96FJ2 89 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 PAGE5Q96GU1 130 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 MKNK2Q9HBH9 465 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 USP21Q9UK80 565 aa13.82□□□□□ -0.2
HDAC8-214ENST00000439122 ZNF18P17022 549 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 CASP1P29466 404 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 PLCD1P51178 756 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 DIXDC1Q155Q3 683 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 C12orf60Q5U649 245 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 CNBD1Q8NA66 436 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 SH3RF3Q8TEJ3 882 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-214ENST00000439122 SAMSN1Q9NSI8 373 aaKnown RBP13.81□□□□□ -0.2
HDAC8-214ENST00000439122 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 MCM7P33993 719 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 ATP2C1P98194 919 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-214ENST00000439122 SYCP1Q15431 976 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 KLHL10Q6JEL2 608 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 FNBP4Q8N3X1 1017 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-214ENST00000439122 PNMA1Q8ND90 353 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-214ENST00000439122 IL17RBQ9NRM6 502 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
HDAC8-214ENST00000439122 TNRC6CQ9HCJ0 1690 aaKnown RBP13.8□□□□□ -0.2
HDAC8-214ENST00000439122 BAG3O95817 575 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 SYT10Q6XYQ8 523 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 HOMER1Q86YM7 354 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 MED15Q96RN5 788 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
HDAC8-214ENST00000439122 ZNF215Q9UL58 517 aaPredicted RBP13.8□□□□□ -0.2
HDAC8-214ENST00000439122 XDHP47989 1333 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 USP17L3A6NCW0 530 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 USP17L4A6NCW7 530 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 UBAP1LF5GYI3 381 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 ADAMTS3O15072 1205 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
HDAC8-214ENST00000439122 GSTO1P78417 241 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 GRIK5Q16478 980 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 FAM196AQ6ZSG2 479 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 USP17L1Q7RTZ2 530 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 ZNF804AQ7Z570 1209 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 DGKHQ86XP1 1220 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 GPKOWQ92917 476 aaPredicted RBP eCLIP13.8□□□□□ -0.2
HDAC8-214ENST00000439122 TMX1Q9H3N1 280 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 MTMR7Q9Y216 660 aa13.8□□□□□ -0.2
HDAC8-214ENST00000439122 CCP110O43303 1012 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 TSPY3P0CV98 308 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 TSPY8P0CW00 308 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 SPECC1LQ69YQ0 1117 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 SH3RF1Q7Z6J0 888 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 STAG2Q8N3U4 1231 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 STAMQ92783 540 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 EP400Q96L91 3159 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 CALML3P27482 149 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 STX17P56962 302 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 DPYDQ12882 1025 aa13.79□□□□□ -0.2
HDAC8-214ENST00000439122 SMYD4Q8IYR2 804 aaPredicted RBP13.79□□□□□ -0.2
HDAC8-214ENST00000439122 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
HDAC8-214ENST00000439122 CD44P16070 742 aaKnown RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 MAPKAPK5Q8IW41 473 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 BLIDQ8IZY5 108 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 IQUBQ8NA54 791 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 SLC44A5Q8NCS7 719 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 GSDMAQ96QA5 445 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 SAP30BPQ9UHR5 308 aaKnown RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 V9GYY5 206 aaPredicted RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 NHSQ6T4R5 1651 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 SYNRGQ9UMZ2 1314 aa13.78□□□□□ -0.2
HDAC8-214ENST00000439122 ADKP55263 362 aaKnown RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 TBX2Q13207 712 aaPredicted RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 BAG1Q99933 345 aaPredicted RBP13.78□□□□□ -0.2
HDAC8-214ENST00000439122 IL17AQ16552 155 aa13.77□□□□□ -0.21
HDAC8-214ENST00000439122 SPATA1Q5VX52 437 aa13.77□□□□□ -0.21
HDAC8-214ENST00000439122 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
HDAC8-214ENST00000439122 BLZF1Q9H2G9 400 aa13.77□□□□□ -0.21
HDAC8-214ENST00000439122 MAD2L2Q9UI95 211 aa13.77□□□□□ -0.21
HDAC8-214ENST00000439122 PCDHA4Q9UN74 947 aa13.77□□□□□ -0.21
HDAC8-214ENST00000439122 ZBTB22O15209 634 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 ARHGAP6O43182 974 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 UFL1O94874 794 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 SLU7O95391 586 aaKnown RBP13.76□□□□□ -0.21
HDAC8-214ENST00000439122 LDHCP07864 332 aa13.76□□□□□ -0.21
HDAC8-214ENST00000439122 GPSM2P81274 684 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms