RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 MOV10L1Q9BXT6 1211 aaKnown RBP12.05□□□□□ -0.48
SMPD4-208ENST00000439029 PPP1R12CQ9BZL4 782 aa12.05□□□□□ -0.48
SMPD4-208ENST00000439029 AATFQ9NY61 560 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMPD4-208ENST00000439029 RFXAPO00287 272 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 CIAO1O76071 339 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 RARBP10826 455 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 MYOGP15173 224 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 TAL1P17542 331 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-208ENST00000439029 ERCC3P19447 782 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 GSTO1P78417 241 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 PPIGQ13427 754 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■□□□ 14.2
SMPD4-208ENST00000439029 RAB3GAP1Q15042 981 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 RASIP1Q5U651 963 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 MFSD5Q6N075 450 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 RNF180Q86T96 592 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 FOXP4Q8IVH2 680 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-208ENST00000439029 XAGE2Q96GT9 111 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 RPAP3Q9H6T3 665 aaPredicted RBP12.04□□□□□ -0.48
SMPD4-208ENST00000439029 SLC28A3Q9HAS3 691 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 HMG20BQ9P0W2 317 aa12.04□□□□□ -0.48
SMPD4-208ENST00000439029 PLS1Q14651 629 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 RAB30Q15771 203 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 AAK1Q2M2I8 961 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 KRT40Q6A162 431 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 CDCA7LQ96GN5 454 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 C12orf42Q96LP6 360 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 DHX36Q9H2U1 1008 aaKnown RBP12.03□□□□□ -0.48
SMPD4-208ENST00000439029 STARD7Q9NQZ5 370 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 TBX21Q9UL17 535 aa12.03□□□□□ -0.48
SMPD4-208ENST00000439029 GBF1Q92538 1859 aa12.02□□□□□ -0.48
SMPD4-208ENST00000439029 A0A1B0GUL7 405 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 GPR37L1O60883 481 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 IL15P40933 162 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-208ENST00000439029 IRX5P78411 483 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-208ENST00000439029 SAMD1Q6SPF0 538 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-208ENST00000439029 ANKRD33Q7Z3H0 272 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 NCAPG2Q86XI2 1143 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 SPATA5Q8NB90 893 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 MAML3Q96JK9 1138 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 NOL10Q9BSC4 688 aaKnown RBP12.02□□□□□ -0.49
SMPD4-208ENST00000439029 CERS4Q9HA82 394 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.02□□□□□ -0.49
SMPD4-208ENST00000439029 FLT1P17948 1338 aa12.02□□□□□ -0.49
SMPD4-208ENST00000439029 PDS5AQ29RF7 1337 aaKnown RBP12.02□□□□□ -0.49
SMPD4-208ENST00000439029 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 ERC2O15083 957 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 TLL1O43897 1013 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 MAP4K4O95819 1239 aaPredicted RBP12.01□□□□□ -0.49
SMPD4-208ENST00000439029 PGK2P07205 417 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 CYP2C18P33260 490 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 ACLYP53396 1101 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 PPP2R2DQ66LE6 453 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 CCDC174Q6PII3 467 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 LBX2Q6XYB7 198 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 WDR63Q8IWG1 891 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 TOX2Q96NM4 488 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 UIMC1Q96RL1 719 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 SPATC1LQ9H0A9 340 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 CD320Q9NPF0 282 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 LRP2BPQ9P2M1 347 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 CDK5RAP2Q96SN8 1893 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 CHD9Q3L8U1 2897 aa12.01□□□□□ -0.49
SMPD4-208ENST00000439029 MYADML2A6NDP7 307 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 STRNO43815 780 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 USP14P54578 494 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 TFCP2Q12800 502 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 PSRC1Q6PGN9 363 aaPredicted RBP12□□□□□ -0.49
SMPD4-208ENST00000439029 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
SMPD4-208ENST00000439029 TMEM199Q8N511 208 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 MRPL50Q8N5N7 158 aaKnown RBP12□□□□□ -0.49
SMPD4-208ENST00000439029 HERVK_113Q902F9 699 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 VTI1AQ96AJ9 217 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 TANGO6Q9C0B7 1094 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 SNRKQ9NRH2 765 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 GINM1Q9NU53 330 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 SLC5A4Q9NY91 659 aa12□□□□□ -0.49
SMPD4-208ENST00000439029 ADAMTS4O75173 837 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 BAG3O95817 575 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 HLA-DOAP06340 250 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 DYNLL1P63167 89 aaKnown RBP11.99□□□□□ -0.49
SMPD4-208ENST00000439029 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
SMPD4-208ENST00000439029 KCNA10Q16322 511 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 GORABQ5T7V8 394 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 NAA16Q6N069 864 aaPredicted RBP11.99□□□□□ -0.49
SMPD4-208ENST00000439029 KIAA1683Q9H0B3 1180 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 FBXO3Q9UK99 471 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 LRRC37A2A6NM11 1700 aa11.99□□□□□ -0.49
SMPD4-208ENST00000439029 SYNRGQ9UMZ2 1314 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 EPOPA6NHQ4 379 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 FGBP02675 491 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 COG2Q14746 738 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 ABCB5Q2M3G0 1257 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 IL23AQ9NPF7 189 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 MTCH2Q9Y6C9 303 aa11.98□□□□□ -0.49
SMPD4-208ENST00000439029 ZNFX1Q9P2E3 1918 aaKnown RBP11.98□□□□□ -0.49
SMPD4-208ENST00000439029 ZNF236Q9UL36 1845 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms