RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 NBPF12Q5TAG4 269 aaPredicted RBP5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 TMEM192Q8IY95 271 aa5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 VWCEQ96DN2 955 aa5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 TNKS2Q9H2K2 1166 aa5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 LRRC4CQ9HCJ2 640 aa5.81□□□□□ -1.48
LSM1P1-201ENST00000438629 LTBP3Q9NS15 1303 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 PRR19A6NJB7 356 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 FAM155AB1AL88 458 aaPredicted RBP5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 CBX7O95931 251 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 FOSL1P15407 271 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 TCEAL1Q15170 157 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 ZYXQ15942 572 aaKnown RBP5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 LARP1BQ659C4 914 aaKnown RBP5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 VHLLQ6RSH7 139 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 CCDC144CPQ8IYA2 1237 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 SHISA5Q8N114 240 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 MFSD4AQ8N468 514 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 NETO1Q8TDF5 533 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 MKRN2Q9H000 416 aaKnown RBP5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 SNX11Q9Y5W9 270 aa5.8□□□□□ -1.48
LSM1P1-201ENST00000438629 COL17A1Q9UMD9 1497 aaPredicted RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 TMEM265A0A087WTH1 108 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 FAM86C2PA6NEL3 165 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 COBLO75128 1261 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 DDAH1O94760 285 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 ZNF143P52747 638 aaPredicted RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 OXCT1P55809 520 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 AUHQ13825 339 aaKnown RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 IFI16Q16666 785 aaKnown RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 LRP10Q7Z4F1 713 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 PMFBP1Q8TBY8 1022 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 ENOX1Q8TC92 643 aaKnown RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 HNRNPLLQ8WVV9 542 aaKnown RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 MKL1Q969V6 931 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 DNAJC2Q99543 621 aaKnown RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 TRIT1Q9H3H1 467 aaKnown RBP5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 PRR13Q9NZ81 148 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 RNF112Q9ULX5 631 aa5.79□□□□□ -1.48
LSM1P1-201ENST00000438629 CLCN7P51798 805 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 NFE2L2Q16236 605 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 DDR2Q16832 855 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 NBPF9Q3BBW0 867 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 KIAA1211LQ6NV74 962 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 FAM178BQ8IXR5 827 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 C7orf61Q8IZ16 206 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 MISP3Q96FF7 219 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 CCDC113Q9H0I3 377 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 FBXL21Q9UKT6 434 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 PCDHB12Q9Y5F1 795 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 CAPN6Q9Y6Q1 641 aa5.78□□□□□ -1.48
LSM1P1-201ENST00000438629 A0A087WZG4 1122 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 TP53P04637 393 aaPredicted RBP5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 CEACAM5P06731 702 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 HEATR6Q6AI08 1181 aaKnown RBP5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 EEPD1Q7L9B9 569 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 DTWD2Q8NBA8 298 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 APBA2Q99767 749 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 GPR62Q9BZJ7 368 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 GBP3Q9H0R5 595 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 EPN3Q9H201 632 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 GPATCH2Q9NW75 528 aa5.77□□□□□ -1.49
LSM1P1-201ENST00000438629 CNTNAP4Q9C0A0 1308 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 ANKRD34BA5PLL1 514 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 C9IYK1 514 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 PPM1BO75688 479 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 TGFB1P01137 390 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 ITIH2P19823 946 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 TNK2Q07912 1038 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 CLEC16AQ2KHT3 1053 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 NOL9Q5SY16 702 aaKnown RBP5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 AXDND1Q5T1B0 1012 aaPredicted RBP5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 C6orf15Q6UXA7 325 aaPredicted RBP5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 THAP5Q7Z6K1 395 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 STK11IPQ8N1F8 1099 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 FAM181AQ8N9Y4 354 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 ASB11Q8WXH4 323 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 ZNF512BQ96KM6 892 aaPredicted RBP5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 Q96M66 194 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 OSBPL2Q9H1P3 480 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 ST7Q9NRC1 585 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 BSDC1Q9NW68 430 aaPredicted RBP5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 ZC3H7BQ9UGR2 993 aaKnown RBP5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 VAV3Q9UKW4 847 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 PCDHB10Q9UN67 800 aa5.76□□□□□ -1.49
LSM1P1-201ENST00000438629 LRRN2O75325 713 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 GJB6O95452 261 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 ITGA4P13612 1032 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 CD247P20963 164 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 PRKCQQ04759 706 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 SERINC3Q13530 473 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 NKPD1Q17RQ9 610 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 CDKAL1Q5VV42 579 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 TDRD10Q5VZ19 366 aaKnown RBP5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 ADAT2Q7Z6V5 191 aaKnown RBP5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 PPFIBP1Q86W92 1011 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 KLHL6Q8WZ60 621 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 ZNF669Q96BR6 464 aaPredicted RBP5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 HAUS7Q99871 368 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 LNPKQ9C0E8 428 aa5.75□□□□□ -1.49
LSM1P1-201ENST00000438629 WHRNQ9P202 907 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms