RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RBAK-RBAKDNI3L0D1 243 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 PPFIA4O75335 1185 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 CYP7A1P22680 504 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 HDLBPQ00341 1268 aaKnown RBP4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 RING1Q06587 406 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 RAD51AP2Q09MP3 1159 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 INPP5AQ14642 412 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 TSNAXIP1Q2TAA8 658 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 CCDC144BQ3MJ40 725 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 ZNF746Q6NUN9 644 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 C22orf34Q6ZV56 151 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 ZNF605Q86T29 641 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 MFSD2AQ8NA29 543 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 PMM1Q92871 262 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 TANGO6Q9C0B7 1094 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 CEP44Q9C0F1 390 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 RNF32Q9H0A6 362 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 ADAMTS10Q9H324 1103 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 CHPF2Q9P2E5 772 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 FAN1Q9Y2M0 1017 aa4.87□□□□□ -1.63
HMGB1P12-201ENST00000438594 PNMA6FA0A0J9YX94 578 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 ENC1O14682 589 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 IGHA2P01877 340 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 GSTT1P30711 240 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 TNK2Q07912 1038 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 SLBPQ14493 270 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 NKG7Q16617 165 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 LRFN4Q6PJG9 635 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 HDXQ7Z353 690 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 CDH24Q86UP0 819 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 DHX38Q92620 1227 aaKnown RBP4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 ALKBH8Q96BT7 664 aaKnown RBP4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 PLPPR2Q96GM1 343 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 PIF1Q9H611 641 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 CACNA2D2Q9NY47 1150 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 JAG2Q9Y219 1238 aa4.86□□□□□ -1.63
HMGB1P12-201ENST00000438594 WASH4PA8MWX3 477 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 CREB3O43889 395 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 EIF3JO75822 258 aaKnown RBP4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 HPXP02790 462 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 TCEAL1Q15170 157 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 RASIP1Q5U651 963 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 C9orf131Q5VYM1 1079 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 TMPRSS7Q7RTY8 843 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 CNPY4Q8N129 248 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 TINF2Q9BSI4 451 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 BRINP2Q9C0B6 783 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 WNT10AQ9GZT5 417 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 C19orf44Q9H6X5 657 aa4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 CNOT6Q9ULM6 557 aaKnown RBP4.85□□□□□ -1.63
HMGB1P12-201ENST00000438594 U2SURPO15042 1029 aaKnown RBP4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 FOXD2O60548 495 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 ESR1P03372 595 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 SYN1P17600 705 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 PDE6BP35913 854 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 HSP90AB2PQ58FF8 381 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 WIPI1Q5MNZ9 446 aaPredicted RBP4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 PRAMEF13Q5VWM6 474 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 PCNX4Q63HM2 1172 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 HID1Q8IV36 788 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 C3orf58Q8NDZ4 430 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 BACH2Q9BYV9 841 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 MCOLN1Q9GZU1 580 aa4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 NOP58Q9Y2X3 529 aaKnown RBP4.84□□□□□ -1.63
HMGB1P12-201ENST00000438594 A0A0G2JLL6 359 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 HMGB1P1B2RPK0 211 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 CELA3AP09093 270 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 TPP2P29144 1249 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 KIR3DL1P43629 444 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 DLG4P78352 724 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 PLCB3Q01970 1234 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 NFIXQ14938 502 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 TCERG1LQ5VWI1 586 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 TMC7Q7Z402 723 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 FAM9BQ8IZU0 186 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 SYTL4Q96C24 671 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 DPH2Q9BQC3 489 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 RBCK1Q9BYM8 510 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 SLC6A17Q9H1V8 727 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 GABBR1Q9UBS5 961 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 BIN2Q9UBW5 565 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 CYP8B1Q9UNU6 501 aa4.83□□□□□ -1.64
HMGB1P12-201ENST00000438594 SCAMP3O14828 347 aaKnown RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 IBSPP21815 317 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 GRK4P32298 578 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 PTPN11Q06124 597 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 EGR3Q06889 387 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 FOXD4Q12950 439 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 LONRF3Q496Y0 759 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 ZNF385BQ569K4 471 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 LDLRAD1Q5T700 205 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 FAM43BQ6ZT52 329 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 BAHD1Q8TBE0 780 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 SGPP1Q9BX95 441 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 MAF1Q9H063 256 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 DUSP13Q9UII6 198 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 KCTD3Q9Y597 815 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 RPS6KL1Q9Y6S9 549 aa4.82□□□□□ -1.64
HMGB1P12-201ENST00000438594 RFXAPO00287 272 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms