RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 TEKT2Q9UIF3 430 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 MCF2P10911 925 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 HARSP12081 509 aaKnown RBP12.67□□□□□ -0.38
PTCH1-209ENST00000437951 VPS16Q9H269 839 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 PDE11AQ9HCR9 933 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 STRN3Q13033 797 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 POSTNQ15063 836 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 RWDD2BP57060 319 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
PTCH1-209ENST00000437951 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTCH1-209ENST00000437951 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 DCTN3O75935 186 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 PPP2R5DQ14738 602 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 DCUN1D2Q6PH85 259 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 ANKRD35Q8N283 1001 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 HELLSQ9NRZ9 838 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 TRMT112Q9UI30 125 aaKnown RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 C6orf118Q5T5N4 469 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 PIP4K2CQ8TBX8 421 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 PTPN23Q9H3S7 1636 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 ATICP31939 592 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 NUDCD3Q8IVD9 361 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 TRIML1Q8N9V2 468 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 PPWD1Q96BP3 646 aaKnown RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 RMDN2Q96LZ7 410 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 CFTRP13569 1480 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 CC2D2AQ9P2K1 1620 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 KRT8P05787 483 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 ZNF277Q9NRM2 450 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 SLC4A4Q9Y6R1 1079 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 HGSO14964 777 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 ATP1A2P50993 1020 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 NONOQ15233 471 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 APLFQ8IW19 511 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 KLHL29Q96CT2 875 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 ZNF202O95125 648 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 KRT4P19013 534 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 PDZD4Q76G19 769 aaPredicted RBP12.66□□□□□ -0.38
PTCH1-209ENST00000437951 LRRC8AQ8IWT6 810 aa12.66□□□□□ -0.38
PTCH1-209ENST00000437951 KPNA2P52292 529 aaKnown RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 STX1BP61266 288 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 ETF1P62495 437 aaKnown RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 PLCB4Q15147 1175 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 OR8K1Q8NGG5 319 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 TMEM87BQ96K49 555 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 TPCN1Q9ULQ1 816 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 SERPINB10P48595 397 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 BZW2Q9Y6E2 419 aaKnown RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 TEDDM1Q5T9Z0 273 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 PAG1Q9NWQ8 432 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 CCDC151A5D8V7 595 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 N4BP1O75113 896 aaKnown RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 GUCY2FP51841 1108 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 TRIML2Q8N7C3 387 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 MRRFQ96E11 262 aaKnown RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 USP26Q9BXU7 913 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 PPP1R12AO14974 1030 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 CHGBP05060 677 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 IL15P40933 162 aaPredicted RBP12.65□□□□□ -0.38
PTCH1-209ENST00000437951 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
PTCH1-209ENST00000437951 GNGT2O14610 69 aa12.65□□□□□ -0.39
PTCH1-209ENST00000437951 P4HA1P13674 534 aa12.65□□□□□ -0.39
PTCH1-209ENST00000437951 MTX1Q13505 466 aa12.65□□□□□ -0.39
PTCH1-209ENST00000437951 PPP1R2P3Q6NXS1 205 aa12.65□□□□□ -0.39
PTCH1-209ENST00000437951 VWA3AA6NCI4 1184 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 ATF2P15336 505 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 TCP11Q8WWU5 503 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 RAB20Q9NX57 234 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 PPP2R2CQ9Y2T4 447 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 MAPK13O15264 365 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 ADCY8P40145 1251 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 GABPAQ06546 454 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 UPF3AQ9H1J1 476 aaKnown RBP12.64□□□□□ -0.39
PTCH1-209ENST00000437951 EPRSP07814 1512 aaKnown RBP12.64□□□□□ -0.39
PTCH1-209ENST00000437951 KRT10P13645 584 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 RPS6KB1P23443 525 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 ATP8B2P98198 1209 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 TADA2BQ86TJ2 420 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 IRX5P78411 483 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-209ENST00000437951 FAM96AQ9H5X1 160 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 RNF113AO15541 343 aaKnown RBP12.64□□□□□ -0.39
PTCH1-209ENST00000437951 GSTA1P08263 222 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 GSTA2P09210 222 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 EEF1B2P24534 225 aaKnown RBP12.64□□□□□ -0.39
PTCH1-209ENST00000437951 BIRC3Q13489 604 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 RAB44Q7Z6P3 723 aaPredicted RBP12.64□□□□□ -0.39
PTCH1-209ENST00000437951 BATF3Q9NR55 127 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 PYGLP06737 847 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 BIRC2Q13490 618 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 NELFBQ8WX92 580 aa12.64□□□□□ -0.39
PTCH1-209ENST00000437951 DPH6Q7L8W6 267 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 C6orf229H3BNL8 230 aa12.63□□□□□ -0.39
PTCH1-209ENST00000437951 DNM2P50570 870 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms