RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 SLC44A5Q8NCS7 719 aa11.13□□□□□ -0.63
LINC00858-202ENST00000437892 MYL10Q9BUA6 226 aa11.13□□□□□ -0.63
LINC00858-202ENST00000437892 IL17RBQ9NRM6 502 aa11.13□□□□□ -0.63
LINC00858-202ENST00000437892 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
LINC00858-202ENST00000437892 HDAC9Q9UKV0 1011 aa11.13□□□□□ -0.63
LINC00858-202ENST00000437892 ISY1Q9ULR0 285 aaKnown RBP11.13□□□□□ -0.63
LINC00858-202ENST00000437892 NMT2O60551 498 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 PRPF40AO75400 957 aaKnown RBP11.12□□□□□ -0.63
LINC00858-202ENST00000437892 RXRAP19793 462 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 UBE2HP62256 183 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
LINC00858-202ENST00000437892 NFIAQ12857 509 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 PICALMQ13492 652 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 GRM4Q14833 912 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 CFAP100Q494V2 611 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 RAB11FIP4Q86YS3 637 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 STK11IPQ8N1F8 1099 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
LINC00858-202ENST00000437892 KHSRPQ92945 711 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00858-202ENST00000437892 ZBED3Q96IU2 234 aaPredicted RBP11.12□□□□□ -0.63
LINC00858-202ENST00000437892 CCDC17Q96LX7 622 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 KAT14Q9H8E8 782 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 FAM198AQ9UFP1 575 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
LINC00858-202ENST00000437892 DDX49Q9Y6V7 483 aaKnown RBP11.12□□□□□ -0.63
LINC00858-202ENST00000437892 CNTNAP5Q8WYK1 1306 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 PRPF3O43395 683 aaKnown RBP11.11□□□□□ -0.63
LINC00858-202ENST00000437892 SHMT1P34896 483 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 GNAQP50148 359 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 KIF23Q02241 960 aaPredicted RBP11.11□□□□□ -0.63
LINC00858-202ENST00000437892 TNIP1Q15025 636 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 NUP133Q8WUM0 1156 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 PHKBQ93100 1093 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 TMOD2Q9NZR1 351 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 CFAP45Q9UL16 551 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 MYH8P13535 1937 aa11.11□□□□□ -0.63
LINC00858-202ENST00000437892 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 DTNBO60941 627 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 RAD17O75943 681 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 TOP1P11387 765 aaKnown RBP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 NCLP19338 710 aaKnown RBP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 U2AF2P26368 475 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 SMARCA1P28370 1054 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 RBM5P52756 815 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 ZNF280AP59817 542 aaPredicted RBP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 CXCL9Q07325 125 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 TRIM29Q14134 588 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 SLC4A8Q2Y0W8 1093 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 PPP1R15BQ5SWA1 713 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 KRT40Q6A162 431 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 CIAPIN1Q6FI81 312 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 CCDC144CPQ8IYA2 1237 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 GPT2Q8TD30 523 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 CHAMP1Q96JM3 812 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 ZNF396Q96N95 335 aaPredicted RBP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 LZTS2Q9BRK4 669 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.1□□□□□ -0.63
LINC00858-202ENST00000437892 SPON1Q9HCB6 807 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 PI4KBQ9UBF8 816 aa11.1□□□□□ -0.63
LINC00858-202ENST00000437892 FZD9O00144 591 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 FIBPO43427 364 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 MMP1P03956 469 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 DLGAP5Q15398 846 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 TATDN1Q6P1N9 297 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 FAM83AQ86UY5 434 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 FOXP4Q8IVH2 680 aaPredicted RBP11.09□□□□□ -0.63
LINC00858-202ENST00000437892 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
LINC00858-202ENST00000437892 LEO1Q8WVC0 666 aaPredicted RBP11.09□□□□□ -0.63
LINC00858-202ENST00000437892 SYAP1Q96A49 352 aaPredicted RBP11.09□□□□□ -0.63
LINC00858-202ENST00000437892 CEP95Q96GE4 821 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 TMEM47Q9BQJ4 181 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 SPZ1Q9BXG8 430 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 DNAJC18Q9H819 358 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 POLR3EQ9NVU0 708 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 MTMR4Q9NYA4 1195 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 HERC5Q9UII4 1024 aaKnown RBP11.09□□□□□ -0.63
LINC00858-202ENST00000437892 SYNPO2Q9UMS6 1093 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 BCS1LQ9Y276 419 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 PCDHAC2Q9Y5I4 1007 aa11.09□□□□□ -0.63
LINC00858-202ENST00000437892 PALM3A6NDB9 673 aaPredicted RBP11.08□□□□□ -0.64
LINC00858-202ENST00000437892 PLEKHA8P1O95397 391 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 YEATS4O95619 227 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 SNHG28P0DPA3 235 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 XBP1P17861 261 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 NASPP49321 788 aaPredicted RBP11.08□□□□□ -0.64
LINC00858-202ENST00000437892 AKAP17AQ02040 695 aaKnown RBP11.08□□□□□ -0.64
LINC00858-202ENST00000437892 PKN1Q16512 942 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 MYSM1Q5VVJ2 828 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 DPF2Q92785 391 aa11.08□□□□□ -0.64
LINC00858-202ENST00000437892 PRMT6Q96LA8 375 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms