RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 JAG1P78504 1218 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 DLK2Q6UY11 383 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 PIGSQ96S52 555 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 SHMT1P34896 483 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 PRKG1Q13976 671 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
LINC01516-201ENST00000436140 HHIPL2Q6UWX4 724 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 DGKHQ86XP1 1220 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 RTKN2Q8IZC4 609 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 ZDHHC15Q96MV8 337 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 ZNF287Q9HBT7 754 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 USP25Q9UHP3 1055 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 MAD2L2Q9UI95 211 aa12.55□□□□□ -0.4
LINC01516-201ENST00000436140 PARP1P09874 1014 aaKnown RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 MCM7P33993 719 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 CERKLQ49MI3 558 aaPredicted RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 NEDD1Q8NHV4 660 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 WASF1Q92558 559 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 STAMQ92783 540 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 MTFR1LQ9H019 292 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 KINO60870 393 aaKnown RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 SCG2P13521 617 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 KIF5BP33176 963 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 RRP1BQ14684 758 aaKnown RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 MAP3K11Q16584 847 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 GH2P01242 217 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 XBP1P17861 261 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 RSBN1LQ6PCB5 846 aaPredicted RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 ANP32BQ92688 251 aaKnown RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 PLIN2Q99541 437 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
LINC01516-201ENST00000436140 MTMR4Q9NYA4 1195 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 RTEL1Q9NZ71 1219 aa12.54□□□□□ -0.4
LINC01516-201ENST00000436140 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
LINC01516-201ENST00000436140 JAKMIP3Q5VZ66 844 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 SLC16A10Q8TF71 515 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 UPF1Q92900 1129 aaKnown RBP eCLIP12.53□□□□□ -0.4
LINC01516-201ENST00000436140 DUOX1Q9NRD9 1551 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 DDAH1O94760 285 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 CALM1P0DP23 149 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 CALM2P0DP24 149 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 CALM3P0DP25 149 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 EEF2P13639 858 aaKnown RBP12.53□□□□□ -0.4
LINC01516-201ENST00000436140 BRAPQ7Z569 592 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 GRAMD1CQ8IYS0 662 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 SUPT20HQ8NEM7 779 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 ZNRF3Q9ULT6 936 aa12.53□□□□□ -0.4
LINC01516-201ENST00000436140 DOCK2Q92608 1830 aa12.52□□□□□ -0.4
LINC01516-201ENST00000436140 NFKBIEO00221 500 aa12.52□□□□□ -0.4
LINC01516-201ENST00000436140 FOXN1O15353 648 aa12.52□□□□□ -0.4
LINC01516-201ENST00000436140 KRT2P35908 639 aa12.52□□□□□ -0.4
LINC01516-201ENST00000436140 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.4
LINC01516-201ENST00000436140 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.4
LINC01516-201ENST00000436140 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
LINC01516-201ENST00000436140 CASP1P29466 404 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 NAPAP54920 295 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 HSP90AA4PQ58FG1 418 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 WWC2Q6AWC2 1192 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 SASS6Q6UVJ0 657 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 MRPS27Q92552 414 aaKnown RBP12.52□□□□□ -0.41
LINC01516-201ENST00000436140 TMOD2Q9NZR1 351 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 PI4KBQ9UBF8 816 aa12.52□□□□□ -0.41
LINC01516-201ENST00000436140 TOP1P11387 765 aaKnown RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 PFKFB1P16118 471 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ECE1P42892 770 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 GABPAQ06546 454 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 DGKZQ13574 1117 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 SLC39A14Q15043 492 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 INF2Q27J81 1249 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 COL11A2P13942 1736 aaPredicted RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 SCN9AQ15858 1988 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 PDIA4P13667 645 aaKnown RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 U2AF2P26368 475 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 PRELPP51888 382 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 TYRO3Q06418 890 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 SNW1Q13573 536 aaKnown RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 SHC4Q6S5L8 630 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 EPSTI1Q96J88 318 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ZFP91Q96JP5 570 aaPredicted RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ELP1O95163 1332 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 VWA3AA6NCI4 1184 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 USP17L10C9JJH3 530 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ZNF202O95125 648 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 PDHBP11177 359 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 CC2D2BQ6DHV5 1058 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ADALQ6DHV7 355 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 GJA10Q969M2 543 aa12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 ZNF70Q9UC06 446 aaPredicted RBP12.51□□□□□ -0.41
LINC01516-201ENST00000436140 A0A1B0GUL6 1792 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms