RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 MCM9Q9NXL9 1143 aa13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DDX20Q9UHI6 824 aaKnown RBP13.27□□□□□ -0.29
SPTLC1P4-201ENST00000435997 GOLIM4O00461 696 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MSCO60682 206 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CYP2D6P10635 497 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 OLFML2BQ68BL8 750 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 TMEM179Q6ZVK1 233 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SIAH1Q8IUQ4 282 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 TRPV1Q8NER1 839 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 LPAR1Q92633 364 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DNAJC2Q99543 621 aaKnown RBP13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MOV10L1Q9BXT6 1211 aaKnown RBP13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SWAP70Q9UH65 585 aa13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 U3KPZ7 1027 aaPredicted RBP13.26□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DNM1LO00429 736 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 HMMRO75330 724 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ADD2P35612 726 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 COG2Q14746 738 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SPATC1LQ9H0A9 340 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DDX19BQ9UMR2 479 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 IVNS1ABPQ9Y6Y0 642 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 RLFQ13129 1914 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 FRMPD3Q5JV73 1810 aa13.25□□□□□ -0.29
SPTLC1P4-201ENST00000435997 RAB11FIP3O75154 756 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 IFIT2P09913 472 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MS4A1P11836 297 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ATP5JP18859 108 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ADORA2AP29274 412 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CYP2C19P33261 490 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SLFNL1Q499Z3 407 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 WDR78Q5VTH9 848 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CLEC10AQ8IUN9 316 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MB21D1Q8N884 522 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DYNLL2Q96FJ2 89 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 HAUS7Q99871 368 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ARMT1Q9H993 441 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CWC22Q9HCG8 908 aaKnown RBP13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ATP8A2Q9NTI2 1148 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 PAG1Q9NWQ8 432 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 HOXC10Q9NYD6 342 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 TMX2Q9Y320 296 aa13.24□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ROBO3Q96MS0 1386 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SMIM22K7EJ46 135 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 PRKAB2O43741 272 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 STRNO43815 780 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MBD4O95243 580 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CHGBP05060 677 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 AKR1B1P15121 316 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ERCC3P19447 782 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ICA1Q05084 483 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 UBE3CQ15386 1083 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 C12orf60Q5U649 245 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ABRAQ8N0Z2 381 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 TANGO6Q9C0B7 1094 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 VCPKMTQ9H867 229 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
SPTLC1P4-201ENST00000435997 COBLO75128 1261 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SNX17Q15036 470 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 C16orf86Q6ZW13 317 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CCDC17Q96LX7 622 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 UBE2OQ9C0C9 1292 aaKnown RBP13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 BOLA2Q9H3K6 86 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ADAMTS5Q9UNA0 930 aa13.22□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CYP2D7A0A087X1C5 515 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 APBB1O00213 710 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 WDR46O15213 610 aaKnown RBP13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 FLOT1O75955 427 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CDK8P49336 464 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DEFB123Q8N688 67 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ATG4CQ96DT6 458 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SENP6Q9GZR1 1112 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 MROH8Q9H579 483 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 SH2D4AQ9H788 454 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 ARHGEF10LQ9HCE6 1279 aa13.21□□□□□ -0.29
SPTLC1P4-201ENST00000435997 CDH23Q9H251 3354 aa13.21□□□□□ -0.3
SPTLC1P4-201ENST00000435997 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 USP17L21D6R901 530 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SEPT4O43236 478 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 MDM2Q00987 491 aaPredicted RBP13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 Q7L0L9 218 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 DPP9Q86TI2 863 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SPICE1Q8N0Z3 855 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 MAML3Q96JK9 1138 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 MTMR10Q9NXD2 777 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 STXBP5LQ9Y2K9 1186 aa13.2□□□□□ -0.3
SPTLC1P4-201ENST00000435997 CNGA1P29973 690 aa13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 RTP1P59025 263 aa13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 RIOX2Q8IUF8 465 aa13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 REPS2Q8NFH8 660 aa13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 PUS7LQ9H0K6 701 aaKnown RBP13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
SPTLC1P4-201ENST00000435997 GREB1LQ9C091 1923 aaPredicted RBP13.18□□□□□ -0.3
SPTLC1P4-201ENST00000435997 SLC25A27O95847 323 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms