RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 MYPNQ86TC9 1320 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
SMPD4-207ENST00000435455 NEFLP07196 543 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 SLC9C1Q4G0N8 1177 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 NBPF11Q86T75 865 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 GPRC5AQ8NFJ5 357 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 COA7Q96BR5 231 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.31■□□□□ 0.68
SMPD4-207ENST00000435455 RABGAP1Q9Y3P9 1069 aa19.31■□□□□ 0.68
SMPD4-207ENST00000435455 IGKV6D-41A0A0C4DH26 115 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 WDR46O15213 610 aaKnown RBP19.3■□□□□ 0.68
SMPD4-207ENST00000435455 TSPY3P0CV98 308 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 TSPY8P0CW00 308 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 CTDSPL2Q05D32 466 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 PPP4R3BQ5MIZ7 849 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 LBX2Q6XYB7 198 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 NEDD1Q8NHV4 660 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 RAET1EQ8TD07 263 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 ARMC5Q96C12 935 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 TANGO6Q9C0B7 1094 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 HOXC10Q9NYD6 342 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 RBPJLQ9UBG7 517 aa19.3■□□□□ 0.68
SMPD4-207ENST00000435455 ERVK-9P63128 1117 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 ERVK-24P63145 666 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 TFAP4Q01664 338 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 COG2Q14746 738 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 KIAA1755Q5JYT7 1200 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 PAGR1Q9BTK6 254 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 TXNRD2Q9NNW7 524 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 MTMR4Q9NYA4 1195 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 RLFQ13129 1914 aa19.29■□□□□ 0.68
SMPD4-207ENST00000435455 SPDYE16A6NNV3 312 aaPredicted RBP19.28■□□□□ 0.68
SMPD4-207ENST00000435455 ORC4O43929 436 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 CCNA1P78396 465 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 PRKCZQ05513 592 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 SPICE1Q8N0Z3 855 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 RUFY2Q8WXA3 655 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 CEP95Q96GE4 821 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 CLIP2Q9UDT6 1046 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 SYNPO2Q9UMS6 1093 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 CENPFP49454 3210 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 LAMA4Q16363 1823 aa19.28■□□□□ 0.68
SMPD4-207ENST00000435455 RAD50Q92878 1312 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 TSPY2A6NKD2 308 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 RAD21O60216 631 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 TTLL1O95922 423 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 MAPK4P31152 587 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 FAM47AQ5JRC9 791 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 CCAR1Q8IX12 1150 aaKnown RBP19.27■□□□□ 0.68
SMPD4-207ENST00000435455 MKL1Q969V6 931 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 DSCC1Q9BVC3 393 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 GABRQQ9UN88 632 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 PARP14Q460N5 1801 aa19.27■□□□□ 0.68
SMPD4-207ENST00000435455 KIAA0100Q14667 2235 aaKnown RBP19.27■□□□□ 0.67
SMPD4-207ENST00000435455 FLOT1O75955 427 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
SMPD4-207ENST00000435455 FGRP09769 529 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 PCP11498 1178 aaKnown RBP19.26■□□□□ 0.67
SMPD4-207ENST00000435455 GRK4P32298 578 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 FLT3LGP49771 235 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 IRF5Q13568 498 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 MB21D1Q8N884 522 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 ZNF333Q96JL9 665 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 CCDC136Q96JN2 1154 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 TOMM22Q9NS69 142 aa19.26■□□□□ 0.67
SMPD4-207ENST00000435455 A0A0G2JMZ2 1700 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 RANBP6O60518 1105 aaKnown RBP19.25■□□□□ 0.67
SMPD4-207ENST00000435455 PEX10O60683 326 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 CNMDO75829 334 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 CHMLP26374 656 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 DSG3P32926 999 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 RGS19P49795 217 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 SOX10P56693 466 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 HAND2P61296 217 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 Q3C1V9 767 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 POTEEQ6S8J3 1075 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 SLAIN1Q8ND83 568 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 RNF41Q9H4P4 317 aaPredicted RBP19.25■□□□□ 0.67
SMPD4-207ENST00000435455 INCENPQ9NQS7 918 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 CTNNA3Q9UI47 895 aa19.25■□□□□ 0.67
SMPD4-207ENST00000435455 RBBP6Q7Z6E9 1792 aaKnown RBP19.24■□□□□ 0.67
SMPD4-207ENST00000435455 F5H6K3 240 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 ZNF213O14771 459 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 ADCY3O60266 1144 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 KLRC3Q07444 240 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 AKNAD1Q5T1N1 836 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 MFSD6Q6ZSS7 791 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 SH3TC2Q8TF17 1288 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 STAG1Q8WVM7 1258 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 CWC22Q9HCG8 908 aaKnown RBP19.24■□□□□ 0.67
SMPD4-207ENST00000435455 BTBD7Q9P203 1132 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 TACC3Q9Y6A5 838 aa19.24■□□□□ 0.67
SMPD4-207ENST00000435455 NDUFB10O96000 172 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 NT5C2P49902 561 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 RRP12Q5JTH9 1297 aaKnown RBP19.23■□□□□ 0.67
SMPD4-207ENST00000435455 FAM83BQ5T0W9 1011 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 PLEKHH3Q7Z736 793 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 GMCL1P1Q8NEA9 526 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 PXYLP1Q8TE99 480 aa19.23■□□□□ 0.67
SMPD4-207ENST00000435455 ATG4CQ96DT6 458 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms