RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ZNF18P17022 549 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 FAM47AQ5JRC9 791 aa21.22■□□□□ 0.99
CLK1-205ENST00000434813 DZIP1Q86YF9 867 aaKnown RBP21.22■□□□□ 0.99
CLK1-205ENST00000434813 CCDC94Q9BW85 323 aaPredicted RBP21.22■□□□□ 0.99
CLK1-205ENST00000434813 FMR1Q06787 632 aaKnown RBP eCLIP21.21■□□□□ 0.99
CLK1-205ENST00000434813 GRAMD1CQ8IYS0 662 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 ROBO3Q96MS0 1386 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 TSPY2A6NKD2 308 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 APBA3O96018 575 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 SCG2P13521 617 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 TTC38Q5R3I4 469 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 KIF18AQ8NI77 898 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 INTS13Q9NVM9 706 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 NFE2L3Q9Y4A8 694 aa21.21■□□□□ 0.99
CLK1-205ENST00000434813 A0A087X0B3 334 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 WNT7AO00755 349 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 PLSCR1O15162 318 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 SLFN14P0C7P3 912 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 TOP1P11387 765 aaKnown RBP21.2■□□□□ 0.98
CLK1-205ENST00000434813 PLCD1P51178 756 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 PFKFB3Q16875 520 aaPredicted RBP21.2■□□□□ 0.98
CLK1-205ENST00000434813 ZNF827Q17R98 1081 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 CT47A1Q5JQC4 288 aaPredicted RBP21.2■□□□□ 0.98
CLK1-205ENST00000434813 RCSD1Q6JBY9 416 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 SH3RF1Q7Z6J0 888 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 PROM2Q8N271 834 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 TMX1Q9H3N1 280 aa21.2■□□□□ 0.98
CLK1-205ENST00000434813 MKRN1Q9UHC7 482 aaKnown RBP21.2■□□□□ 0.98
CLK1-205ENST00000434813 TMEM232C9JQI7 657 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 ERCC5P28715 1186 aaPredicted RBP21.19■□□□□ 0.98
CLK1-205ENST00000434813 KIF5BP33176 963 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 TRAPPC10P48553 1259 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 ST5P78524 1137 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 ATP2C1P98194 919 aaPredicted RBP21.19■□□□□ 0.98
CLK1-205ENST00000434813 PDCL2Q8N4E4 241 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 SYMPKQ92797 1274 aaKnown RBP21.19■□□□□ 0.98
CLK1-205ENST00000434813 DHX58Q96C10 678 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 EPSTI1Q96J88 318 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 MCM9Q9NXL9 1143 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 NAV1Q8NEY1 1877 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 CCP110O43303 1012 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 TUBB4AP04350 444 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 GRAPQ13588 217 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 WDR66Q8TBY9 1149 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
CLK1-205ENST00000434813 LEMD3Q9Y2U8 911 aa21.19■□□□□ 0.98
CLK1-205ENST00000434813 NOM1Q5C9Z4 860 aaKnown RBP21.18■□□□□ 0.98
CLK1-205ENST00000434813 C12orf60Q5U649 245 aa21.18■□□□□ 0.98
CLK1-205ENST00000434813 PRR5LQ6MZQ0 368 aa21.18■□□□□ 0.98
CLK1-205ENST00000434813 JAG2Q9Y219 1238 aa21.18■□□□□ 0.98
CLK1-205ENST00000434813 SERPINB2P05120 415 aa21.17■□□□□ 0.98
CLK1-205ENST00000434813 LDHBP07195 334 aaKnown RBP21.17■□□□□ 0.98
CLK1-205ENST00000434813 USP17L8P0C7I0 530 aa21.17■□□□□ 0.98
CLK1-205ENST00000434813 NLRP5P59047 1200 aa21.17■□□□□ 0.98
CLK1-205ENST00000434813 TBX2Q13207 712 aaPredicted RBP21.17■□□□□ 0.98
CLK1-205ENST00000434813 SF3B2Q13435 895 aaKnown RBP21.17■□□□□ 0.98
CLK1-205ENST00000434813 DGKHQ86XP1 1220 aa21.17■□□□□ 0.98
CLK1-205ENST00000434813 PAGE5Q96GU1 130 aa21.17■□□□□ 0.98
CLK1-205ENST00000434813 MED15Q96RN5 788 aa21.17■□□□□ 0.98
CLK1-205ENST00000434813 XDHP47989 1333 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 ZNF174Q15697 407 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 FCHSD1Q86WN1 690 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 TRMT44Q8IYL2 757 aaKnown RBP21.16■□□□□ 0.98
CLK1-205ENST00000434813 ANKS1AQ92625 1134 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 KAT14Q9H8E8 782 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 ANKIB1Q9P2G1 1089 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 GSTO1P78417 241 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 PTGDRQ13258 359 aa21.16■□□□□ 0.98
CLK1-205ENST00000434813 RPGRQ92834 1020 aaKnown RBP21.16■□□□□ 0.98
CLK1-205ENST00000434813 CALML3P27482 149 aa21.15■□□□□ 0.98
CLK1-205ENST00000434813 DPYDQ12882 1025 aa21.15■□□□□ 0.98
CLK1-205ENST00000434813 PIK3AP1Q6ZUJ8 805 aa21.15■□□□□ 0.98
CLK1-205ENST00000434813 C15orf52Q6ZUT6 534 aaKnown RBP21.15■□□□□ 0.98
CLK1-205ENST00000434813 CCDC125Q86Z20 511 aa21.15■□□□□ 0.98
CLK1-205ENST00000434813 GSDMAQ96QA5 445 aa21.15■□□□□ 0.98
CLK1-205ENST00000434813 SH3GLB2Q9NR46 395 aa21.15■□□□□ 0.98
CLK1-205ENST00000434813 VWA3AA6NCI4 1184 aa21.14■□□□□ 0.98
CLK1-205ENST00000434813 USP5P45974 858 aa21.14■□□□□ 0.98
CLK1-205ENST00000434813 TFAP4Q01664 338 aa21.14■□□□□ 0.98
CLK1-205ENST00000434813 TMEM139Q8IV31 216 aa21.14■□□□□ 0.98
CLK1-205ENST00000434813 SH3RF3Q8TEJ3 882 aaPredicted RBP21.14■□□□□ 0.98
CLK1-205ENST00000434813 PYM1Q9BRP8 204 aaKnown RBP21.14■□□□□ 0.98
CLK1-205ENST00000434813 IL17RBQ9NRM6 502 aa21.14■□□□□ 0.98
CLK1-205ENST00000434813 CDK11BP21127 795 aaKnown RBP21.14■□□□□ 0.97
CLK1-205ENST00000434813 AFMP43652 599 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 PPP4CP60510 307 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 CUL4BQ13620 913 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 CCDC178Q5BJE1 867 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 PPP4R3BQ5MIZ7 849 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 SPECC1LQ69YQ0 1117 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 ZNF804AQ7Z570 1209 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 L2HGDHQ9H9P8 463 aa21.14■□□□□ 0.97
CLK1-205ENST00000434813 DDX60LQ5H9U9 1706 aaKnown RBP21.13■□□□□ 0.97
CLK1-205ENST00000434813 SYNRGQ9UMZ2 1314 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 ARHGAP6O43182 974 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 BAG3O95817 575 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 GRM4Q14833 912 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 E2F4Q16254 413 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 HSP90AA4PQ58FG1 418 aa21.13■□□□□ 0.97
CLK1-205ENST00000434813 AMOTL1Q8IY63 956 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms