RNA–Protein interactions for RNA: ENST00000433680.1

TNFAIP3-204, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-204ENST00000433680 ZYXQ15942 572 aaKnown RBP17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 TSGA10IPQ3SY00 556 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 CLEC10AQ8IUN9 316 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 VCPKMTQ9H867 229 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 ZSWIM5Q9P217 1185 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 STX8Q9UNK0 236 aa17.35■□□□□ 0.37
TNFAIP3-204ENST00000433680 HSPA1AP0DMV8 641 aaKnown RBP17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 HSPA1BP0DMV9 641 aaKnown RBP17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 OSBPP22059 807 aa17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 HSPA4P34932 840 aa17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 KRT32Q14532 448 aa17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 TAF1CQ15572 869 aaPredicted RBP17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 TREML2Q5T2D2 321 aa17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 DGKHQ86XP1 1220 aa17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 PARK7Q99497 189 aaKnown RBP17.34■□□□□ 0.37
TNFAIP3-204ENST00000433680 USP17L15C9J2P7 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L13C9JLJ4 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L11C9JVI0 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L18D6R9N7 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L22D6RA61 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L17D6RBQ6 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L19D6RCP7 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L20D6RJB6 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 VCAM1P19320 739 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 MCCP23508 829 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP17L24Q0WX57 530 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 NOM1Q5C9Z4 860 aaKnown RBP17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 GMCL1P1Q8NEA9 526 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 KCNB2Q92953 911 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 ZSCAN10Q96SZ4 725 aaPredicted RBP17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 UBAC1Q9BSL1 405 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 MTA3Q9BTC8 594 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 USP26Q9BXU7 913 aa17.33■□□□□ 0.36
TNFAIP3-204ENST00000433680 F5H6K3 240 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 WDR46O15213 610 aaKnown RBP17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 NMT2O60551 498 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 TOP1P11387 765 aaKnown RBP17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 KLRC3Q07444 240 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 DGKZQ13574 1117 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 STOX1Q6ZVD7 989 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 ANKS1AQ92625 1134 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 TAF6LQ9Y6J9 622 aa17.32■□□□□ 0.36
TNFAIP3-204ENST00000433680 ERICH2A1L162 156 aa17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 TLR2O60603 784 aa17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 TBC1D8O95759 1140 aa17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 CTCFP49711 727 aaPredicted RBP17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 IRX3P78415 501 aaPredicted RBP17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 CRHR2Q13324 411 aa17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 CATSPERGQ6ZRH7 1159 aa17.31■□□□□ 0.36
TNFAIP3-204ENST00000433680 TNKSO95271 1327 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 FOXN1O15353 648 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 MCM5P33992 734 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 RCSD1Q6JBY9 416 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 CYB5R4Q7L1T6 521 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 MB21D2Q8IYB1 491 aaPredicted RBP17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 LRRC47Q8N1G4 583 aaKnown RBP17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 NKX2-3Q8TAU0 364 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 GTF3C2Q8WUA4 911 aaPredicted RBP17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 GMCL1Q96IK5 515 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 NEK1Q96PY6 1258 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 TMEM47Q9BQJ4 181 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 ZKSCAN3Q9BRR0 538 aa17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 ASCC2Q9H1I8 757 aaPredicted RBP17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 RPAP3Q9H6T3 665 aaPredicted RBP17.3■□□□□ 0.36
TNFAIP3-204ENST00000433680 RAD21O60216 631 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 NDUFB10O96000 172 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 GCLCP48506 637 aaPredicted RBP17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 C8orf34Q49A92 452 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 KIAA1755Q5JYT7 1200 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 SLFN13Q68D06 897 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 RASEFQ8IZ41 740 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 SPICE1Q8N0Z3 855 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 ENAHQ8N8S7 591 aaPredicted RBP17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 SMCR8Q8TEV9 937 aaPredicted RBP17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 TMEM87BQ96K49 555 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 RNF216Q9NWF9 866 aaPredicted RBP17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 HOXC10Q9NYD6 342 aa17.29■□□□□ 0.36
TNFAIP3-204ENST00000433680 MYPNQ86TC9 1320 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 WDR19Q8NEZ3 1342 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 IFIT3O14879 490 aaKnown RBP17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 CYP2C8P10632 490 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 COG2Q14746 738 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 IFIT1BQ5T764 474 aaKnown RBP17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 TANGO6Q9C0B7 1094 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 KAT14Q9H8E8 782 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 SNX14Q9Y5W7 946 aa17.28■□□□□ 0.36
TNFAIP3-204ENST00000433680 ADGRA2Q96PE1 1338 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 GPR25O00155 361 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 PRC1O43663 620 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 PSMA5P28066 241 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 HERVK_113P62684 666 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 SEC23AQ15436 765 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 C17orf99Q6UX52 265 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
TNFAIP3-204ENST00000433680 TMTC2Q8N394 836 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms