RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 LETMD1Q6P1Q0 360 aa8.5□□□□□ -1.05
USP54-206ENST00000433394 TMEM192Q8IY95 271 aa8.5□□□□□ -1.05
USP54-206ENST00000433394 KLHL6Q8WZ60 621 aa8.5□□□□□ -1.05
USP54-206ENST00000433394 HAUS7Q99871 368 aa8.5□□□□□ -1.05
USP54-206ENST00000433394 ACSS3Q9H6R3 686 aa8.5□□□□□ -1.05
USP54-206ENST00000433394 ALX3O95076 343 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 APPP05067 770 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 HSP90AA2PQ14568 343 aaPredicted RBP8.49□□□□□ -1.05
USP54-206ENST00000433394 TMEM67Q5HYA8 995 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 POMZP3Q6PJE2 187 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 PAOXQ6QHF9 649 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 WFDC12Q8WWY7 111 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 COX4I2Q96KJ9 171 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 ASPNQ9BXN1 380 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 KCNF1Q9H3M0 494 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 SPC25Q9HBM1 224 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 TPX2Q9ULW0 747 aaKnown RBP8.49□□□□□ -1.05
USP54-206ENST00000433394 PTCH2Q9Y6C5 1203 aa8.49□□□□□ -1.05
USP54-206ENST00000433394 hCG_2014768A0A024R1R8 64 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 DIAPH1O60610 1272 aaKnown RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 DNAJC6O75061 913 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 NFICP08651 508 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 ITGA4P13612 1032 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 IREB2P48200 963 aaKnown RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 NOL9Q5SY16 702 aaKnown RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 NBPF12Q5TAG4 269 aaPredicted RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 ZBTB38Q8NAP3 1195 aaPredicted RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 FBLIM1Q8WUP2 373 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 ASCC2Q9H1I8 757 aaPredicted RBP8.48□□□□□ -1.05
USP54-206ENST00000433394 FBXL21Q9UKT6 434 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 CNTNAP5Q8WYK1 1306 aa8.48□□□□□ -1.05
USP54-206ENST00000433394 FAM95CA0A1B0GW59 222 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 EPHX1P07099 455 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 BMP3P12645 472 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 ANAPC15P60006 121 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 PTPROQ16827 1216 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 Q6ZS46 218 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 FILIP1Q7Z7B0 1213 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 KREMEN1Q96MU8 473 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 SEMA6CQ9H3T2 930 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 PRDM10Q9NQV6 1147 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 WHRNQ9P202 907 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 LEMD3Q9Y2U8 911 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
USP54-206ENST00000433394 TRAV20A0A0B4J274 112 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 DHX15O43143 795 aaKnown RBP8.46□□□□□ -1.06
USP54-206ENST00000433394 MAP4P27816 1152 aaKnown RBP8.46□□□□□ -1.06
USP54-206ENST00000433394 IGBP1P78318 339 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 NFKBIBQ15653 356 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 ANKRD39Q53RE8 183 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 CDPF1Q6NVV7 123 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 UBE3DQ7Z6J8 389 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 C7orf61Q8IZ16 206 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 RNF141Q8WVD5 230 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 FAM46AQ96IP4 442 aaKnown RBP8.46□□□□□ -1.06
USP54-206ENST00000433394 ZNF512BQ96KM6 892 aaPredicted RBP8.46□□□□□ -1.06
USP54-206ENST00000433394 LGR6Q9HBX8 967 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 KCNH3Q9ULD8 1083 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 ADAMTS8Q9UP79 889 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 PLAAQ9Y263 795 aa8.46□□□□□ -1.06
USP54-206ENST00000433394 ASMTLO95671 621 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 NOS3P29474 1203 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 SQSTM1Q13501 440 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 AUHQ13825 339 aaKnown RBP8.45□□□□□ -1.06
USP54-206ENST00000433394 NBPF9Q3BBW0 867 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 SGO2Q562F6 1265 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 AXDND1Q5T1B0 1012 aaPredicted RBP8.45□□□□□ -1.06
USP54-206ENST00000433394 KIAA0907Q7Z7F0 614 aaPredicted RBP8.45□□□□□ -1.06
USP54-206ENST00000433394 CDH24Q86UP0 819 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 PPFIBP1Q86W92 1011 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
USP54-206ENST00000433394 MYRFLQ96LU7 910 aa8.45□□□□□ -1.06
USP54-206ENST00000433394 AARSD1Q9BTE6 412 aaKnown RBP8.45□□□□□ -1.06
USP54-206ENST00000433394 C9IYK1 514 aa8.44□□□□□ -1.06
USP54-206ENST00000433394 DCAF15Q66K64 600 aa8.44□□□□□ -1.06
USP54-206ENST00000433394 TXNRD3Q86VQ6 643 aa8.44□□□□□ -1.06
USP54-206ENST00000433394 BVESQ8NE79 360 aa8.44□□□□□ -1.06
USP54-206ENST00000433394 FGD4Q96M96 766 aa8.44□□□□□ -1.06
USP54-206ENST00000433394 FAM153BP0C7A2 387 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 CD247P20963 164 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 GYS2P54840 703 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 MBTPS1Q14703 1052 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 DNAJB8Q8NHS0 232 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 FBXL18Q96ME1 805 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 DSCC1Q9BVC3 393 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 BRINP2Q9C0B6 783 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 KLHL25Q9H0H3 589 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 KANSL2Q9H9L4 492 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 GTF2IRD1Q9UHL9 959 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 AKT3Q9Y243 479 aa8.43□□□□□ -1.06
USP54-206ENST00000433394 A0A087WZG4 1122 aa8.42□□□□□ -1.06
USP54-206ENST00000433394 RNF225M0QZC1 329 aaPredicted RBP8.42□□□□□ -1.06
USP54-206ENST00000433394 ADGRE1Q14246 886 aa8.42□□□□□ -1.06
USP54-206ENST00000433394 BEND4Q6ZU67 534 aa8.42□□□□□ -1.06
USP54-206ENST00000433394 SCUBE1Q8IWY4 988 aa8.42□□□□□ -1.06
USP54-206ENST00000433394 FAM20CQ8IXL6 584 aa8.42□□□□□ -1.06
USP54-206ENST00000433394 TOP6BLQ8N6T0 577 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms