RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SNW1Q13573 536 aaKnown RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 PDIA5Q14554 519 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 MARCH6O60337 910 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 PAFAH1B1P43034 410 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 FAM196AQ6ZSG2 479 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 HS2ST1Q7LGA3 356 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 NUTM1Q86Y26 1132 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 RBM17Q96I25 401 aaKnown RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 SETDB2Q96T68 719 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 FRMD8Q9BZ67 464 aaPredicted RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 TACC1O75410 805 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 TNNI2P48788 182 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 CUL1Q13616 776 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 CCDC96Q2M329 555 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 ANKS1AQ92625 1134 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 CNKSR1Q969H4 720 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 PRDM16Q9HAZ2 1276 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 PARP2Q9UGN5 583 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 PA2G4Q9UQ80 394 aaKnown RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 USP16Q9Y5T5 823 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 GTPBP10A4D1E9 387 aaKnown RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 ANKRD62A6NC57 917 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 P4HA2O15460 535 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 XPCQ01831 940 aaPredicted RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 APOA5Q6Q788 366 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 BBOF1Q8ND07 529 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 GOLGA1Q92805 767 aa4.22□□□□□ -1.73
SHPRH-205ENST00000433355 BICC1Q9H694 974 aaKnown RBP4.22□□□□□ -1.73
SHPRH-205ENST00000433355 A0A1B0GUL7 405 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 PVALEFA0A1B0GWK0 134 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 G3V3G9 751 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 IDH1O75874 414 aaKnown RBP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 MECOMQ03112 1051 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 DCAF8Q5TAQ9 597 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 RDM1Q8NG50 284 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 ENOX1Q8TC92 643 aaKnown RBP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 POP5Q969H6 163 aaKnown RBP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 RWDD2AQ9UIY3 292 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 SNX14Q9Y5W7 946 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 AKAP11Q9UKA4 1901 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 PATL2C9JE40 543 aaKnown RBP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 IFIT3O14879 490 aaKnown RBP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 GPAA1O43292 621 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 PPFIA4O75335 1185 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 GSPT1P15170 499 aaKnown RBP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 ZNF75DP51815 510 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 NOLC1Q14978 699 aaKnown RBP eCLIP4.21□□□□□ -1.73
SHPRH-205ENST00000433355 POTEDQ86YR6 584 aa4.21□□□□□ -1.73
SHPRH-205ENST00000433355 MIF4GDA9UHW6 222 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 SLC16A3O15427 465 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 LDHBP07195 334 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 TCP1P17987 556 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 ANKS4BQ8N8V4 417 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 ZSCAN10Q96SZ4 725 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CCDC77Q9BR77 488 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 NSRP1Q9H0G5 558 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 GCOM1H8Y6P7 765 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 IRS4O14654 1257 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 MYZAPP0CAP1 466 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 VPS72Q15906 364 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 KYAT1Q16773 422 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 SLC10A5Q5PT55 438 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 KANSL2Q9H9L4 492 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 RAI14Q9P0K7 980 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 HERC5Q9UII4 1024 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 RTCBQ9Y3I0 505 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 BCORQ6W2J9 1755 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 UBN2Q6ZU65 1347 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 SMTNP53814 917 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 IRF5Q13568 498 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 SPDYCQ5MJ68 293 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 KRT79Q5XKE5 535 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 DCAF15Q66K64 600 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 DBNLQ9UJU6 430 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CTAGE15A4D2H0 777 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 ACTN4O43707 911 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CTAGE8P0CG41 777 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 EZRP15311 586 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 HOXA10P31260 410 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 EIF3BP55884 814 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 ZNF662Q6ZS27 426 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 B4GALNT4Q76KP1 1039 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CTAGE6Q86UF2 777 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CTAGE4Q8IX94 777 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 KIAA1524Q8TCG1 905 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 MKNK1Q9BUB5 465 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 MTMR6Q9Y217 621 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 KLF18A0A0U1RQI7 1052 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 UNCXA6NJT0 531 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 FMNL1O95466 1100 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 HSPD1P10809 573 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 PPP2R5AQ15172 486 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 IFIT1BQ5T764 474 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 APLFQ8IW19 511 aaPredicted RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 HNRNPLLQ8WVV9 542 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 SREK1Q8WXA9 508 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CEP63Q96MT8 703 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 CNOT10Q9H9A5 744 aaKnown RBP4.21□□□□□ -1.74
SHPRH-205ENST00000433355 ARHGEF37A1IGU5 675 aa4.21□□□□□ -1.74
SHPRH-205ENST00000433355 MSH5O43196 834 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms