RNA–Protein interactions for RNA: ENST00000432213.1

SEC13-212, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-212ENST00000432213 MOV10L1Q9BXT6 1211 aaKnown RBP17.23■□□□□ 0.35
SEC13-212ENST00000432213 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
SEC13-212ENST00000432213 MYH4Q9Y623 1939 aa17.23■□□□□ 0.35
SEC13-212ENST00000432213 A0A1W2PPC1 479 aa17.22■□□□□ 0.35
SEC13-212ENST00000432213 SLC15A5A6NIM6 579 aa17.22■□□□□ 0.35
SEC13-212ENST00000432213 MPHOSPH10O00566 681 aaKnown RBP17.22■□□□□ 0.35
SEC13-212ENST00000432213 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
SEC13-212ENST00000432213 BMP8BP34820 402 aa17.22■□□□□ 0.35
SEC13-212ENST00000432213 ADD2P35612 726 aa17.22■□□□□ 0.35
SEC13-212ENST00000432213 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
SEC13-212ENST00000432213 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
SEC13-212ENST00000432213 CRNKL1Q9BZJ0 848 aaKnown RBP17.22■□□□□ 0.35
SEC13-212ENST00000432213 COBLO75128 1261 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 USP14P54578 494 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 ANO1Q5XXA6 986 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
SEC13-212ENST00000432213 SPICE1Q8N0Z3 855 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
SEC13-212ENST00000432213 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
SEC13-212ENST00000432213 HOXC6P09630 235 aa17.2■□□□□ 0.34
SEC13-212ENST00000432213 IFIT2P09913 472 aaKnown RBP17.2■□□□□ 0.34
SEC13-212ENST00000432213 CYBAP13498 195 aa17.2■□□□□ 0.34
SEC13-212ENST00000432213 CAPN2P17655 700 aa17.2■□□□□ 0.34
SEC13-212ENST00000432213 TTF1Q15361 905 aaPredicted RBP17.2■□□□□ 0.34
SEC13-212ENST00000432213 TRMT44Q8IYL2 757 aaKnown RBP17.2■□□□□ 0.34
SEC13-212ENST00000432213 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
SEC13-212ENST00000432213 TANGO6Q9C0B7 1094 aa17.2■□□□□ 0.34
SEC13-212ENST00000432213 PAG1Q9NWQ8 432 aa17.2■□□□□ 0.34
SEC13-212ENST00000432213 MCM3APO60318 1980 aa17.19■□□□□ 0.34
SEC13-212ENST00000432213 ERCC3P19447 782 aa17.19■□□□□ 0.34
SEC13-212ENST00000432213 ADORA2AP29274 412 aa17.19■□□□□ 0.34
SEC13-212ENST00000432213 MDM2Q00987 491 aaPredicted RBP17.19■□□□□ 0.34
SEC13-212ENST00000432213 CWC22Q9HCG8 908 aaKnown RBP17.19■□□□□ 0.34
SEC13-212ENST00000432213 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
SEC13-212ENST00000432213 LAMA2P24043 3122 aaKnown RBP17.18■□□□□ 0.34
SEC13-212ENST00000432213 ATN1P54259 1190 aaPredicted RBP17.18■□□□□ 0.34
SEC13-212ENST00000432213 CCNA1P78396 465 aa17.18■□□□□ 0.34
SEC13-212ENST00000432213 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
SEC13-212ENST00000432213 PRAMEF19Q5SWL8 479 aa17.18■□□□□ 0.34
SEC13-212ENST00000432213 RPAP2Q8IXW5 612 aaPredicted RBP17.18■□□□□ 0.34
SEC13-212ENST00000432213 HAUS7Q99871 368 aa17.18■□□□□ 0.34
SEC13-212ENST00000432213 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.18■□□□□ 0.34
SEC13-212ENST00000432213 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
SEC13-212ENST00000432213 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
SEC13-212ENST00000432213 FBXO28Q9NVF7 368 aa17.18■□□□□ 0.34
SEC13-212ENST00000432213 ATP5JP18859 108 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 CNGA1P29973 690 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 CDK8P49336 464 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 COG2Q14746 738 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 GJC2Q5T442 439 aaPredicted RBP17.17■□□□□ 0.34
SEC13-212ENST00000432213 C12orf60Q5U649 245 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 TSHZ3Q63HK5 1081 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
SEC13-212ENST00000432213 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
SEC13-212ENST00000432213 TMEM179Q6ZVK1 233 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 TDHQ8IZJ6 230 aa17.17■□□□□ 0.34
SEC13-212ENST00000432213 UBE2OQ9C0C9 1292 aaKnown RBP17.17■□□□□ 0.34
SEC13-212ENST00000432213 SENP6Q9GZR1 1112 aaPredicted RBP17.17■□□□□ 0.34
SEC13-212ENST00000432213 USP17L12C9JPN9 530 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 USP17L21D6R901 530 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 DSG3P32926 999 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 ATP2B2Q01814 1243 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 ICA1Q05084 483 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 TMEM132BQ14DG7 1078 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 MFSD14CQ5VZR4 134 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 VCPKMTQ9H867 229 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 DDX19BQ9UMR2 479 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 TMX2Q9Y320 296 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 IVNS1ABPQ9Y6Y0 642 aa17.16■□□□□ 0.34
SEC13-212ENST00000432213 FLOT1O75955 427 aa17.15■□□□□ 0.34
SEC13-212ENST00000432213 EEF2P13639 858 aaKnown RBP17.15■□□□□ 0.34
SEC13-212ENST00000432213 LRIT3Q3SXY7 679 aa17.15■□□□□ 0.34
SEC13-212ENST00000432213 CTR9Q6PD62 1173 aa17.15■□□□□ 0.34
SEC13-212ENST00000432213 C16orf86Q6ZW13 317 aa17.15■□□□□ 0.34
SEC13-212ENST00000432213 RAB11FIP3O75154 756 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 GLRX3O76003 335 aaKnown RBP17.14■□□□□ 0.33
SEC13-212ENST00000432213 PLS1Q14651 629 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 STK11IPQ8N1F8 1099 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 LPAR1Q92633 364 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 LENG1Q96BZ8 264 aaPredicted RBP17.14■□□□□ 0.33
SEC13-212ENST00000432213 SWAP70Q9UH65 585 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 SLC4A4Q9Y6R1 1079 aa17.14■□□□□ 0.33
SEC13-212ENST00000432213 HMMRO75330 724 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 PGK2P07205 417 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 TAL1P17542 331 aaPredicted RBP17.13■□□□□ 0.33
SEC13-212ENST00000432213 RTP1P59025 263 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 OLFML2BQ68BL8 750 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 DPP9Q86TI2 863 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 NCAPG2Q86XI2 1143 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 SHCBP1Q8NEM2 672 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 REPS2Q8NFH8 660 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 NUP88Q99567 741 aaPredicted RBP17.13■□□□□ 0.33
SEC13-212ENST00000432213 ATP8A2Q9NTI2 1148 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 MTMR10Q9NXD2 777 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
SEC13-212ENST00000432213 ADAMTS5Q9UNA0 930 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms