RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 STRIP1Q5VSL9 837 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 RESP18Q5W5W9 173 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 SDF4Q9BRK5 362 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 PLIN4Q96Q06 1357 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 ESPNB1AK53 854 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 AP5Z1O43299 807 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 ADCY5O95622 1261 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 GABPAQ06546 454 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 STX1AQ16623 288 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 SLC35G1Q2M3R5 365 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 TNFRSF25Q93038 417 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 CEP95Q96GE4 821 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 OSBPL5Q9H0X9 879 aaPredicted RBP22.49■■□□□ 1.19
VRK2-205ENST00000432057 BRMS1Q9HCU9 246 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 HPSEQ9Y251 543 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 PCDHAC2Q9Y5I4 1007 aa22.49■■□□□ 1.19
VRK2-205ENST00000432057 A0A087WWV3 80 aa22.48■■□□□ 1.19
VRK2-205ENST00000432057 NOM1Q5C9Z4 860 aaKnown RBP22.48■■□□□ 1.19
VRK2-205ENST00000432057 C11orf57Q6ZUT1 292 aaPredicted RBP22.48■■□□□ 1.19
VRK2-205ENST00000432057 KRI1Q8N9T8 703 aaKnown RBP22.48■■□□□ 1.19
VRK2-205ENST00000432057 GNAQP50148 359 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 FKBP1AP62942 108 aaKnown RBP22.47■■□□□ 1.19
VRK2-205ENST00000432057 GPKOWQ92917 476 aaPredicted RBP eCLIP22.47■■□□□ 1.19
VRK2-205ENST00000432057 FBXO2Q9UK22 296 aaPredicted RBP22.47■■□□□ 1.19
VRK2-205ENST00000432057 FAM237AA0A1B0GTK4 181 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 PALM3A6NDB9 673 aaPredicted RBP22.47■■□□□ 1.19
VRK2-205ENST00000432057 C21orf2O43822 256 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 SYKP43405 635 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 PLCB2Q00722 1185 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 KIAA2012Q0VF49 1180 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 NFIAQ12857 509 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 ZDHHC15Q96MV8 337 aa22.47■■□□□ 1.19
VRK2-205ENST00000432057 GOLGA8HP0CJ92 632 aa22.46■■□□□ 1.19
VRK2-205ENST00000432057 ZNF165P49910 485 aa22.46■■□□□ 1.19
VRK2-205ENST00000432057 NLRP5P59047 1200 aa22.46■■□□□ 1.19
VRK2-205ENST00000432057 GRIN1Q05586 938 aa22.46■■□□□ 1.19
VRK2-205ENST00000432057 ADAMTS3O15072 1205 aa22.45■■□□□ 1.19
VRK2-205ENST00000432057 CYTH3O43739 400 aa22.45■■□□□ 1.19
VRK2-205ENST00000432057 TOP1P11387 765 aaKnown RBP22.45■■□□□ 1.19
VRK2-205ENST00000432057 AKR1B1P15121 316 aa22.45■■□□□ 1.19
VRK2-205ENST00000432057 HS1BP3Q53T59 392 aa22.45■■□□□ 1.19
VRK2-205ENST00000432057 CEP131Q9UPN4 1083 aa22.45■■□□□ 1.19
VRK2-205ENST00000432057 TRIM75PA6NK02 468 aa22.45■■□□□ 1.18
VRK2-205ENST00000432057 WNT7AO00755 349 aa22.45■■□□□ 1.18
VRK2-205ENST00000432057 PTPREP23469 700 aa22.45■■□□□ 1.18
VRK2-205ENST00000432057 NOVP48745 357 aa22.45■■□□□ 1.18
VRK2-205ENST00000432057 CC2D2BQ6DHV5 1058 aa22.45■■□□□ 1.18
VRK2-205ENST00000432057 SERPINB13Q9UIV8 391 aa22.45■■□□□ 1.18
VRK2-205ENST00000432057 RBM5P52756 815 aaKnown RBP eCLIP22.44■■□□□ 1.18
VRK2-205ENST00000432057 CACNB3P54284 484 aa22.44■■□□□ 1.18
VRK2-205ENST00000432057 SPECC1Q5M775 1068 aa22.44■■□□□ 1.18
VRK2-205ENST00000432057 SUPT20HQ8NEM7 779 aa22.44■■□□□ 1.18
VRK2-205ENST00000432057 CPVLQ9H3G5 476 aa22.44■■□□□ 1.18
VRK2-205ENST00000432057 KIAA1468Q9P260 1216 aa22.44■■□□□ 1.18
VRK2-205ENST00000432057 CCDC39Q9UFE4 941 aa22.44■■□□□ 1.18
VRK2-205ENST00000432057 NOL7Q9UMY1 257 aaKnown RBP22.44■■□□□ 1.18
VRK2-205ENST00000432057 PPIP5K2O43314 1243 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 CAVIN2O95810 425 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 SHMT1P34896 483 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 CLEC10AQ8IUN9 316 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 ZFPM1Q8IX07 1006 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 TIGD1Q96MW7 591 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 ANO10Q9NW15 660 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 SWAP70Q9UH65 585 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 KLRF2D3W0D1 207 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 HLA-DOAP06340 250 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 PARP1P09874 1014 aaKnown RBP22.43■■□□□ 1.18
VRK2-205ENST00000432057 WWC2Q6AWC2 1192 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 TYW1BQ6NUM6 668 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 USP17L2Q6R6M4 530 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 SH3GLB2Q9NR46 395 aa22.43■■□□□ 1.18
VRK2-205ENST00000432057 IGKV6D-41A0A0C4DH26 115 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 YDJCA8MPS7 323 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 PTMAP06454 111 aaKnown RBP22.42■■□□□ 1.18
VRK2-205ENST00000432057 HDLBPQ00341 1268 aaKnown RBP22.42■■□□□ 1.18
VRK2-205ENST00000432057 ZSCAN30Q86W11 494 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 LZTS2Q9BRK4 669 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 MRIQ9BWK5 157 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 MTMR4Q9NYA4 1195 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 KCNH3Q9ULD8 1083 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 SRPRBQ9Y5M8 271 aaKnown RBP22.42■■□□□ 1.18
VRK2-205ENST00000432057 MYO3BQ8WXR4 1341 aa22.42■■□□□ 1.18
VRK2-205ENST00000432057 ARFGEF1Q9Y6D6 1849 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 SLURP2P0DP57 97 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 CALML3P27482 149 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 IQCB1Q15051 598 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 TTC38Q5R3I4 469 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 PIK3AP1Q6ZUJ8 805 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 TTLL6Q8N841 843 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 SPZ1Q9BXG8 430 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 COL4A5P29400 1685 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 USP17L5A8MUK1 530 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 EIF6P56537 245 aaKnown RBP22.41■■□□□ 1.18
VRK2-205ENST00000432057 HEATR3Q7Z4Q2 680 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 BLIDQ8IZY5 108 aa22.41■■□□□ 1.18
VRK2-205ENST00000432057 LRRC47Q8N1G4 583 aaKnown RBP22.41■■□□□ 1.18
VRK2-205ENST00000432057 STXBP3O00186 592 aa22.4■■□□□ 1.18
VRK2-205ENST00000432057 TCP10Q12799 353 aa22.4■■□□□ 1.18
VRK2-205ENST00000432057 ZNF174Q15697 407 aa22.4■■□□□ 1.18
VRK2-205ENST00000432057 CCDC93Q567U6 631 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms