RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 HMMRO75330 724 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 SGPL1O95470 568 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 GH2P01242 217 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PDE6AP16499 860 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 CAPN2P17655 700 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 USP5P45974 858 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 HERVK_113P62684 666 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 IRX3P78415 501 aaPredicted RBP11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 CLASRPQ8N2M8 674 aaKnown RBP11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TXNRD2Q9NNW7 524 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PLXNB2O15031 1838 aa11.43□□□□□ -0.58
CDC42-IT1-201ENST00000431803 NAV1Q8NEY1 1877 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TRIOBPQ9H2D6 2365 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TCRBV5S4A2TA0A5A2 114 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 RAB11FIP3O75154 756 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 FARP2O94887 1054 aaPredicted RBP11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 HMGCRP04035 888 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PLCD1P51178 756 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 SLC9C2Q5TAH2 1124 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 TTC6Q86TZ1 520 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 C12orf42Q96LP6 360 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 RCAN3Q9UKA8 241 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 LAMA3Q16787 3333 aa11.42□□□□□ -0.58
CDC42-IT1-201ENST00000431803 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 MAGEB6P1A0A0J9YX57 407 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 APBB1O00213 710 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 GOLIM4O00461 696 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PEX10O60683 326 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 IFIT2P09913 472 aaKnown RBP11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 SHMT1P34896 483 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 GABPAQ06546 454 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 GPRC5AQ8NFJ5 357 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 GTF3C2Q8WUA4 911 aaPredicted RBP11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 ZDHHC16Q969W1 377 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 DEFB118Q96PH6 123 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 HTATIP2Q9BUP3 242 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 KIAA1683Q9H0B3 1180 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 RBPJLQ9UBG7 517 aa11.41□□□□□ -0.58
CDC42-IT1-201ENST00000431803 ZNF532Q9HCE3 1301 aa11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 FXR1P51114 621 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 ERVK-9P63128 1117 aa11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 ERVK-24P63145 666 aa11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 ABCB5Q2M3G0 1257 aa11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 CERKLQ49MI3 558 aaPredicted RBP11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 SOCS4Q8WXH5 440 aa11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 DNAJC2Q99543 621 aaKnown RBP11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 PCDHGA10Q9Y5H3 936 aa11.4□□□□□ -0.58
CDC42-IT1-201ENST00000431803 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ATP5JP18859 108 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 VCAM1P19320 739 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MAPK4P31152 587 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 GUCY1A2P33402 732 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP14P54578 494 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TRIM32Q13049 653 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PDE3AQ14432 1141 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RAB3GAP1Q15042 981 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 Q3C1V9 767 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MAP3K21Q5TCX8 1036 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 C20orf194Q5TEA3 1177 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ADGRD1Q6QNK2 874 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 LCORLQ8N3X6 602 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ACER1Q8TDN7 264 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TRIB2Q92519 343 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP6NLQ92738 828 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 DPF3Q92784 378 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 EDC3Q96F86 508 aaKnown RBP11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 FEZ1Q99689 392 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PORCNQ9H237 461 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PAG1Q9NWQ8 432 aa11.39□□□□□ -0.59
CDC42-IT1-201ENST00000431803 RPTORQ8N122 1335 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L15C9J2P7 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L13C9JLJ4 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L11C9JVI0 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L18D6R9N7 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L22D6RA61 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L17D6RBQ6 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L19D6RCP7 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L20D6RJB6 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CNMDO75829 334 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 TFRCP02786 760 aaKnown RBP11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 POLR3DP05423 398 aaPredicted RBP11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 PTPREP23469 700 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ADD2P35612 726 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 USP17L24Q0WX57 530 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 ZYXQ15942 572 aaKnown RBP11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 MORN1Q5T089 497 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 LBX2Q6XYB7 198 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 CATSPERGQ6ZRH7 1159 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 GPR142Q7Z601 462 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 SDR42E1Q8WUS8 393 aa11.38□□□□□ -0.59
CDC42-IT1-201ENST00000431803 HAUS7Q99871 368 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms