RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 TRDNQ13061 729 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 KIAA1755Q5JYT7 1200 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 TREML2Q5T2D2 321 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 GADL1Q6ZQY3 521 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 CYB5R4Q7L1T6 521 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 CFHR5Q9BXR6 569 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 VCPKMTQ9H867 229 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 SAGE1Q9NXZ1 904 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 TMOD4Q9NZQ9 345 aa16.97■□□□□ 0.31
CSTF3-202ENST00000431742 ALDH1A1P00352 501 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 VCAM1P19320 739 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 ANTXR2P58335 489 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 ATP2B2Q01814 1243 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 COL9A3Q14050 684 aaPredicted RBP16.96■□□□□ 0.31
CSTF3-202ENST00000431742 ZYXQ15942 572 aaKnown RBP16.96■□□□□ 0.31
CSTF3-202ENST00000431742 RALYLQ86SE5 291 aaKnown RBP16.96■□□□□ 0.31
CSTF3-202ENST00000431742 LPAR1Q92633 364 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 RNF186Q9NXI6 227 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 CLIP2Q9UDT6 1046 aa16.96■□□□□ 0.31
CSTF3-202ENST00000431742 ZKSCAN1P17029 563 aaPredicted RBP16.95■□□□□ 0.3
CSTF3-202ENST00000431742 HOXA7P31268 230 aaPredicted RBP16.95■□□□□ 0.3
CSTF3-202ENST00000431742 OTUD7BQ6GQQ9 843 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 IQCA1Q86XH1 822 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
CSTF3-202ENST00000431742 GMCL1P1Q8NEA9 526 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 ANKS1AQ92625 1134 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 TTC14Q96N46 770 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 ZSCAN10Q96SZ4 725 aaPredicted RBP16.95■□□□□ 0.3
CSTF3-202ENST00000431742 ZKSCAN3Q9BRR0 538 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 STX8Q9UNK0 236 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 SNX14Q9Y5W7 946 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 MGAMO43451 1857 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 ADGRA2Q96PE1 1338 aa16.95■□□□□ 0.3
CSTF3-202ENST00000431742 PDHXO00330 501 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 CA12O43570 354 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 KRT32Q14532 448 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 SEC23AQ15436 765 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 CCDC178Q5BJE1 867 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 DGKHQ86XP1 1220 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 ENAHQ8N8S7 591 aaPredicted RBP16.94■□□□□ 0.3
CSTF3-202ENST00000431742 TMEM47Q9BQJ4 181 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 GOPCQ9HD26 462 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 TNKSO95271 1327 aa16.94■□□□□ 0.3
CSTF3-202ENST00000431742 F5H6K3 240 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 WDR46O15213 610 aaKnown RBP16.93■□□□□ 0.3
CSTF3-202ENST00000431742 NDUFB10O96000 172 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 TOP1P11387 765 aaKnown RBP16.93■□□□□ 0.3
CSTF3-202ENST00000431742 KLRC3Q07444 240 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 PABPC4Q13310 644 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSTF3-202ENST00000431742 NEK1Q96PY6 1258 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 UBAC1Q9BSL1 405 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 MTA3Q9BTC8 594 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 WDR19Q8NEZ3 1342 aa16.93■□□□□ 0.3
CSTF3-202ENST00000431742 ZSWIM8A7E2V4 1837 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 TRPA1O75762 1119 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 MCCP23508 829 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 MCM5P33992 734 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 CRHR2Q13324 411 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 TAF1CQ15572 869 aaPredicted RBP16.92■□□□□ 0.3
CSTF3-202ENST00000431742 SPICE1Q8N0Z3 855 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 IL17RAQ96F46 866 aa16.92■□□□□ 0.3
CSTF3-202ENST00000431742 PARK7Q99497 189 aaKnown RBP16.92■□□□□ 0.3
CSTF3-202ENST00000431742 RPAP3Q9H6T3 665 aaPredicted RBP16.92■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 PRC1O43663 620 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 HSPA1AP0DMV8 641 aaKnown RBP16.91■□□□□ 0.3
CSTF3-202ENST00000431742 HSPA1BP0DMV9 641 aaKnown RBP16.91■□□□□ 0.3
CSTF3-202ENST00000431742 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 CATSPERGQ6ZRH7 1159 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 CHST3Q7LGC8 479 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 GMCL1Q96IK5 515 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 ASCC2Q9H1I8 757 aaPredicted RBP16.91■□□□□ 0.3
CSTF3-202ENST00000431742 R3HDMLQ9H3Y0 253 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 PNMA3Q9UL41 463 aa16.91■□□□□ 0.3
CSTF3-202ENST00000431742 CASP8AP2Q9UKL3 1982 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 CYP2C8P10632 490 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 ANAPC15P60006 121 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 EXOSC10Q01780 885 aaKnown RBP16.9■□□□□ 0.3
CSTF3-202ENST00000431742 NOM1Q5C9Z4 860 aaKnown RBP16.9■□□□□ 0.3
CSTF3-202ENST00000431742 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 RASGRP2Q7LDG7 609 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 IGDCC4Q8TDY8 1250 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 JAKMIP1Q96N16 626 aaKnown RBP16.9■□□□□ 0.3
CSTF3-202ENST00000431742 ZFYVE28Q9HCC9 887 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 MYH6P13533 1939 aa16.9■□□□□ 0.3
CSTF3-202ENST00000431742 SH2B2O14492 632 aaPredicted RBP16.89■□□□□ 0.29
CSTF3-202ENST00000431742 IFIT3O14879 490 aaKnown RBP16.89■□□□□ 0.29
CSTF3-202ENST00000431742 FOXN1O15353 648 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 TLR2O60603 784 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 TBC1D8O95759 1140 aa16.89■□□□□ 0.29
CSTF3-202ENST00000431742 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms