RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PTPDC1A2A3K4 754 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 FAM196BA6NMK8 535 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 RXRAP19793 462 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 MAP3K10Q02779 954 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 RTN1Q16799 776 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 FANCBQ8NB91 859 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 CEP95Q96GE4 821 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 MAP3K14Q99558 947 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.26■□□□□ 0.99
HMGN1-206ENST00000431390 FAM217BQ9NTX9 383 aaPredicted RBP21.26■□□□□ 0.99
HMGN1-206ENST00000431390 MTMR4Q9NYA4 1195 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 KIF3AQ9Y496 699 aa21.26■□□□□ 0.99
HMGN1-206ENST00000431390 PITPNM2Q9BZ72 1349 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 JAK2O60674 1132 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 PDCP20941 246 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 CDC27P30260 824 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 RAB3GAP1Q15042 981 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 KRT26Q7Z3Y9 468 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 PNMA1Q8ND90 353 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 NUP133Q8WUM0 1156 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 TEPSINQ96N21 525 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 RBM28Q9NW13 759 aaKnown RBP21.25■□□□□ 0.99
HMGN1-206ENST00000431390 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
HMGN1-206ENST00000431390 ADM5C9JUS6 153 aa21.24■□□□□ 0.99
HMGN1-206ENST00000431390 SLURP2P0DP57 97 aa21.24■□□□□ 0.99
HMGN1-206ENST00000431390 TOP1P11387 765 aaKnown RBP21.24■□□□□ 0.99
HMGN1-206ENST00000431390 ADD1P35611 737 aaKnown RBP21.24■□□□□ 0.99
HMGN1-206ENST00000431390 ANGEL2Q5VTE6 544 aaKnown RBP21.24■□□□□ 0.99
HMGN1-206ENST00000431390 TMEM47Q9BQJ4 181 aa21.24■□□□□ 0.99
HMGN1-206ENST00000431390 DEFB129Q9H1M3 183 aa21.24■□□□□ 0.99
HMGN1-206ENST00000431390 PPP2R3BQ9Y5P8 575 aa21.24■□□□□ 0.99
HMGN1-206ENST00000431390 FAM155AB1AL88 458 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-206ENST00000431390 NTRK3Q16288 839 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 RGMBQ6NW40 437 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 TMEM179Q6ZVK1 233 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 CCDC144CPQ8IYA2 1237 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 GBA2Q9HCG7 927 aaPredicted RBP21.23■□□□□ 0.99
HMGN1-206ENST00000431390 MYH4Q9Y623 1939 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 MPHOSPH10O00566 681 aaKnown RBP21.23■□□□□ 0.99
HMGN1-206ENST00000431390 TTLL1O95922 423 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 SYT1P21579 422 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 ABCB5Q2M3G0 1257 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 CDAN1Q8IWY9 1227 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 FAM184AQ8NB25 1140 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 GGA3Q9NZ52 723 aa21.23■□□□□ 0.99
HMGN1-206ENST00000431390 STX6O43752 255 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 BRD1O95696 1058 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 IFNAR1P17181 557 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 PKP1Q13835 747 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 CTCFLQ8NI51 663 aaPredicted RBP21.22■□□□□ 0.99
HMGN1-206ENST00000431390 DCPSQ96C86 337 aaKnown RBP21.22■□□□□ 0.99
HMGN1-206ENST00000431390 HOOK2Q96ED9 719 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 DDX11Q96FC9 970 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 KANSL2Q9H9L4 492 aa21.22■□□□□ 0.99
HMGN1-206ENST00000431390 STK36Q9NRP7 1315 aa21.21■□□□□ 0.99
HMGN1-206ENST00000431390 KIF5BP33176 963 aa21.21■□□□□ 0.99
HMGN1-206ENST00000431390 LARP1BQ659C4 914 aaKnown RBP21.21■□□□□ 0.99
HMGN1-206ENST00000431390 C2orf69Q8N8R5 385 aa21.21■□□□□ 0.99
HMGN1-206ENST00000431390 CABP5Q9NP86 173 aa21.21■□□□□ 0.99
HMGN1-206ENST00000431390 NYAP2Q9P242 653 aa21.2■□□□□ 0.98
HMGN1-206ENST00000431390 ORC3Q9UBD5 711 aaPredicted RBP21.2■□□□□ 0.98
HMGN1-206ENST00000431390 DTNBO60941 627 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 GDF11O95390 407 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 FDPSP14324 419 aaKnown RBP21.19■□□□□ 0.98
HMGN1-206ENST00000431390 KIF23Q02241 960 aaPredicted RBP21.19■□□□□ 0.98
HMGN1-206ENST00000431390 GRM4Q14833 912 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 SCAF8Q9UPN6 1271 aaKnown RBP21.19■□□□□ 0.98
HMGN1-206ENST00000431390 ZDHHC9Q9Y397 364 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 MYH6P13533 1939 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 ATAD5Q96QE3 1844 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 GUCY1A2P33402 732 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 ZNF157P51786 506 aaPredicted RBP21.19■□□□□ 0.98
HMGN1-206ENST00000431390 SSRP1Q08945 709 aaKnown RBP21.19■□□□□ 0.98
HMGN1-206ENST00000431390 RRP1BQ14684 758 aaKnown RBP21.19■□□□□ 0.98
HMGN1-206ENST00000431390 TMTC3Q6ZXV5 915 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 MIGA2Q7L4E1 593 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 RGS22Q8NE09 1264 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 MKL1Q969V6 931 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 CCDC102AQ96A19 550 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 CLIP2Q9UDT6 1046 aa21.19■□□□□ 0.98
HMGN1-206ENST00000431390 FMNL1O95466 1100 aaPredicted RBP21.18■□□□□ 0.98
HMGN1-206ENST00000431390 GH2P01242 217 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 GNAQP50148 359 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 ICA1Q05084 483 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 SEPT2Q15019 361 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 DCAF15Q66K64 600 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 NBPF11Q86T75 865 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 TRIM22Q8IYM9 498 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 TNPO1Q92973 898 aaKnown RBP21.18■□□□□ 0.98
HMGN1-206ENST00000431390 SAGE1Q9NXZ1 904 aa21.18■□□□□ 0.98
HMGN1-206ENST00000431390 CAP2P40123 477 aa21.17■□□□□ 0.98
HMGN1-206ENST00000431390 RNF26Q9BY78 433 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-206ENST00000431390 GINM1Q9NU53 330 aa21.17■□□□□ 0.98
HMGN1-206ENST00000431390 SYNPO2Q9UMS6 1093 aa21.17■□□□□ 0.98
HMGN1-206ENST00000431390 MTMR6Q9Y217 621 aa21.17■□□□□ 0.98
HMGN1-206ENST00000431390 TNRC18O15417 2968 aaPredicted RBP21.17■□□□□ 0.98
HMGN1-206ENST00000431390 PHF20L1A8MW92 1017 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 ZSCAN22P10073 491 aaPredicted RBP21.16■□□□□ 0.98
HMGN1-206ENST00000431390 FUT2Q10981 343 aa21.16■□□□□ 0.98
HMGN1-206ENST00000431390 SHROOM1Q2M3G4 852 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms