RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 FKTNO75072 461 aa21.96■■□□□ 1.11
DDR1-236ENST00000431373 IRX3P78415 501 aaPredicted RBP21.96■■□□□ 1.11
DDR1-236ENST00000431373 SMCR8Q8TEV9 937 aaPredicted RBP21.96■■□□□ 1.11
DDR1-236ENST00000431373 IL17RBQ9NRM6 502 aa21.96■■□□□ 1.11
DDR1-236ENST00000431373 PARP14Q460N5 1801 aa21.96■■□□□ 1.11
DDR1-236ENST00000431373 USP17L15C9J2P7 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L13C9JLJ4 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L11C9JVI0 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L18D6R9N7 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L22D6RA61 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L17D6RBQ6 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L19D6RCP7 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L20D6RJB6 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 USP17L24Q0WX57 530 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 KIAA1755Q5JYT7 1200 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 C17orf99Q6UX52 265 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 MKL1Q969V6 931 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 KRT23Q9C075 422 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 RPAP3Q9H6T3 665 aaPredicted RBP21.95■■□□□ 1.1
DDR1-236ENST00000431373 CPA4Q9UI42 421 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 SYNPO2Q9UMS6 1093 aa21.95■■□□□ 1.1
DDR1-236ENST00000431373 B4E1Z4 1266 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 NMT2O60551 498 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 SP3Q02447 781 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 SPICE1Q8N0Z3 855 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 NKX2-3Q8TAU0 364 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 TCP11L1Q9NUJ3 509 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 RLFQ13129 1914 aa21.94■■□□□ 1.1
DDR1-236ENST00000431373 WDR46O15213 610 aaKnown RBP21.93■■□□□ 1.1
DDR1-236ENST00000431373 MGAMO43451 1857 aa21.93■■□□□ 1.1
DDR1-236ENST00000431373 RAD21O60216 631 aa21.93■■□□□ 1.1
DDR1-236ENST00000431373 KDM4AO75164 1064 aa21.93■■□□□ 1.1
DDR1-236ENST00000431373 TRDNQ13061 729 aa21.93■■□□□ 1.1
DDR1-236ENST00000431373 CATSPERGQ6ZRH7 1159 aa21.93■■□□□ 1.1
DDR1-236ENST00000431373 LRRC47Q8N1G4 583 aaKnown RBP21.93■■□□□ 1.1
DDR1-236ENST00000431373 STX8Q9UNK0 236 aa21.93■■□□□ 1.1
DDR1-236ENST00000431373 F5H6K3 240 aa21.92■■□□□ 1.1
DDR1-236ENST00000431373 GCLCP48506 637 aaPredicted RBP21.92■■□□□ 1.1
DDR1-236ENST00000431373 NOVP48745 357 aa21.92■■□□□ 1.1
DDR1-236ENST00000431373 KLRC3Q07444 240 aa21.92■■□□□ 1.1
DDR1-236ENST00000431373 NECTIN1Q15223 517 aa21.92■■□□□ 1.1
DDR1-236ENST00000431373 P2RX7Q99572 595 aaKnown RBP21.92■■□□□ 1.1
DDR1-236ENST00000431373 TANGO6Q9C0B7 1094 aa21.92■■□□□ 1.1
DDR1-236ENST00000431373 TAF6LQ9Y6J9 622 aa21.92■■□□□ 1.1
DDR1-236ENST00000431373 E7EWF7 191 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 SLC27A2O14975 620 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 NDUFB10O96000 172 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 BCRP11274 1271 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 HERVK_113P62684 666 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 IQCA1Q86XH1 822 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 GMCL1P1Q8NEA9 526 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 ERO1AQ96HE7 468 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 ZSWIM5Q9P217 1185 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 ZSWIM8A7E2V4 1837 aa21.91■■□□□ 1.1
DDR1-236ENST00000431373 REC8O95072 547 aa21.9■■□□□ 1.1
DDR1-236ENST00000431373 CCDC178Q5BJE1 867 aa21.9■■□□□ 1.1
DDR1-236ENST00000431373 CREB3L3Q68CJ9 461 aa21.9■■□□□ 1.1
DDR1-236ENST00000431373 GTF3C2Q8WUA4 911 aaPredicted RBP21.9■■□□□ 1.1
DDR1-236ENST00000431373 TTC14Q96N46 770 aa21.9■■□□□ 1.1
DDR1-236ENST00000431373 ZKSCAN3Q9BRR0 538 aa21.9■■□□□ 1.1
DDR1-236ENST00000431373 TOP1P11387 765 aaKnown RBP21.89■■□□□ 1.09
DDR1-236ENST00000431373 FAM83BQ5T0W9 1011 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 RNF20Q5VTR2 975 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 STOX1Q6ZVD7 989 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 RALYLQ86SE5 291 aaKnown RBP21.89■■□□□ 1.09
DDR1-236ENST00000431373 ANKRD13CQ8N6S4 541 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 NCOA7Q8NI08 942 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 CD99L2Q8TCZ2 262 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 A0A0G2JMZ2 1700 aa21.89■■□□□ 1.09
DDR1-236ENST00000431373 COL11A1P12107 1806 aaPredicted RBP21.88■■□□□ 1.09
DDR1-236ENST00000431373 LACTBP83111 547 aaPredicted RBP21.88■■□□□ 1.09
DDR1-236ENST00000431373 COG2Q14746 738 aa21.88■■□□□ 1.09
DDR1-236ENST00000431373 KIF22Q14807 665 aa21.88■■□□□ 1.09
DDR1-236ENST00000431373 FAM110CQ1W6H9 321 aa21.88■■□□□ 1.09
DDR1-236ENST00000431373 COL13A1Q5TAT6 717 aaPredicted RBP21.88■■□□□ 1.09
DDR1-236ENST00000431373 SLFN13Q68D06 897 aa21.88■■□□□ 1.09
DDR1-236ENST00000431373 RCSD1Q6JBY9 416 aa21.88■■□□□ 1.09
DDR1-236ENST00000431373 ZSCAN10Q96SZ4 725 aaPredicted RBP21.88■■□□□ 1.09
DDR1-236ENST00000431373 NUP88Q99567 741 aaPredicted RBP21.88■■□□□ 1.09
DDR1-236ENST00000431373 UBAC1Q9BSL1 405 aa21.88■■□□□ 1.09
DDR1-236ENST00000431373 FLOT1O75955 427 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 LBX2Q6XYB7 198 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 DGKHQ86XP1 1220 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 TMEM47Q9BQJ4 181 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 HOXC10Q9NYD6 342 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 MORF4L1Q9UBU8 362 aa21.87■■□□□ 1.09
DDR1-236ENST00000431373 TNKSO95271 1327 aa21.86■■□□□ 1.09
DDR1-236ENST00000431373 MYPNQ86TC9 1320 aa21.86■■□□□ 1.09
DDR1-236ENST00000431373 SPDYE16A6NNV3 312 aaPredicted RBP21.86■■□□□ 1.09
DDR1-236ENST00000431373 ARHGEF6Q15052 776 aa21.86■■□□□ 1.09
DDR1-236ENST00000431373 CTU1Q7Z7A3 348 aaKnown RBP21.86■■□□□ 1.09
DDR1-236ENST00000431373 GMCL1Q96IK5 515 aa21.86■■□□□ 1.09
DDR1-236ENST00000431373 PAGR1Q9BTK6 254 aa21.86■■□□□ 1.09
DDR1-236ENST00000431373 GTF3C3Q9Y5Q9 886 aa21.86■■□□□ 1.09
DDR1-236ENST00000431373 BMP3P12645 472 aa21.85■■□□□ 1.09
DDR1-236ENST00000431373 DSG3P32926 999 aa21.85■■□□□ 1.09
DDR1-236ENST00000431373 ENAHQ8N8S7 591 aaPredicted RBP21.85■■□□□ 1.09
DDR1-236ENST00000431373 FBXO28Q9NVF7 368 aa21.85■■□□□ 1.09
DDR1-236ENST00000431373 RBPJLQ9UBG7 517 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms