RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 CCDC84Q86UT8 332 aaPredicted RBP18.06■□□□□ 0.48
RIF1-204ENST00000430328 SPZ1Q9BXG8 430 aa18.06■□□□□ 0.48
RIF1-204ENST00000430328 FANCCQ00597 558 aa18.06■□□□□ 0.48
RIF1-204ENST00000430328 PDZD4Q76G19 769 aaPredicted RBP18.06■□□□□ 0.48
RIF1-204ENST00000430328 NOP9Q86U38 636 aaKnown RBP18.06■□□□□ 0.48
RIF1-204ENST00000430328 IQCDQ96DY2 449 aa18.06■□□□□ 0.48
RIF1-204ENST00000430328 SMYD2Q9NRG4 433 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 HNRNPCP07910 306 aaKnown RBP eCLIP18.05■□□□□ 0.485e-6■■■□□ 16.4
RIF1-204ENST00000430328 NMIQ13287 307 aaPredicted RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 SNX21Q969T3 373 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 UPF3AQ9H1J1 476 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 CCNT1O60563 726 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 DKC1O60832 514 aaKnown RBP eCLIP18.05■□□□□ 0.48
RIF1-204ENST00000430328 ST5P78524 1137 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 TSTA3Q13630 321 aaPredicted RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 MPRIPQ6WCQ1 1025 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 KLHL29Q96CT2 875 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 INTS9Q9NV88 658 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 PGBD1Q96JS3 809 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 APOA1P02647 267 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 YWHAEP62258 255 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 NME8Q8N427 588 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 ZCRB1Q8TBF4 217 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 DDX28Q9NUL7 540 aaKnown RBP18.05■□□□□ 0.48
RIF1-204ENST00000430328 ITKQ08881 620 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 RAB20Q9NX57 234 aa18.05■□□□□ 0.48
RIF1-204ENST00000430328 POLR2DO15514 142 aaKnown RBP18.04■□□□□ 0.48
RIF1-204ENST00000430328 PRPF6O94906 941 aaKnown RBP18.04■□□□□ 0.48
RIF1-204ENST00000430328 SPDYE1Q8NFV5 336 aaPredicted RBP18.04■□□□□ 0.48
RIF1-204ENST00000430328 TSHZ3Q63HK5 1081 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 CSRNP1Q96S65 589 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 ZFYVE1Q9HBF4 777 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 NOD1Q9Y239 953 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
RIF1-204ENST00000430328 PRPSAP1Q14558 356 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 MAGEB6P1A0A0J9YX57 407 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 SDSP20132 328 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 PICALMQ13492 652 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 TEX11Q8IYF3 940 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 TSC1Q92574 1164 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 JPH4Q96JJ6 628 aa18.04■□□□□ 0.48
RIF1-204ENST00000430328 SLC12A1Q13621 1099 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 ATP6V1E2Q96A05 226 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 SAAL1Q96ER3 474 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 TRPC6Q9Y210 931 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 RAB3GAP1Q15042 981 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 BBOF1Q8ND07 529 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 NBPF10Q6P3W6 841 aaKnown RBP18.03■□□□□ 0.48
RIF1-204ENST00000430328 SH2D4AQ9H788 454 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 ITM2BQ9Y287 266 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 KCNK3O14649 394 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 IFNA8P32881 189 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 HADHQ16836 314 aaKnown RBP18.03■□□□□ 0.48
RIF1-204ENST00000430328 RUNDC3BQ96NL0 473 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 CD19P15391 556 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 BRDTQ58F21 947 aaPredicted RBP18.03■□□□□ 0.48
RIF1-204ENST00000430328 TCEANC2Q96MN5 208 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 ESYT1Q9BSJ8 1104 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 MAPK8IP1Q9UQF2 711 aa18.03■□□□□ 0.48
RIF1-204ENST00000430328 ARHGEF35A5YM69 484 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 APBA1Q02410 837 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 DYNC1I2Q13409 638 aaKnown RBP18.02■□□□□ 0.48
RIF1-204ENST00000430328 RINT1Q6NUQ1 792 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 MLKLQ8NB16 471 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 PLCG2P16885 1265 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 RRP15Q9Y3B9 282 aaKnown RBP18.02■□□□□ 0.48
RIF1-204ENST00000430328 LETM2Q2VYF4 491 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 ING2Q9H160 280 aa18.02■□□□□ 0.48
RIF1-204ENST00000430328 WARS2Q9UGM6 360 aaKnown RBP18.02■□□□□ 0.48
RIF1-204ENST00000430328 TTI1O43156 1089 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 ATF2P15336 505 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 KSR1Q8IVT5 923 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 FAM95CA0A1B0GW59 222 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 KRT75O95678 551 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 HDAC4P56524 1084 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 LONRF3Q496Y0 759 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 GIPC2Q8TF65 315 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 SH3GL3Q99963 347 aa18.02■□□□□ 0.47
RIF1-204ENST00000430328 GRIN1Q05586 938 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 GCNT3O95395 438 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 PLEKHA4Q9H4M7 779 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 STMN3Q9NZ72 180 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 GON4LQ3T8J9 2241 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 FAM133BQ5BKY9 247 aaKnown RBP18.01■□□□□ 0.47
RIF1-204ENST00000430328 TEX13AQ9BXU3 409 aaPredicted RBP18.01■□□□□ 0.47
RIF1-204ENST00000430328 GNA14O95837 355 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 TMEM232C9JQI7 657 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 KRT19P08727 400 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 TRIM27P14373 513 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 ATF7P17544 494 aaPredicted RBP18.01■□□□□ 0.47
RIF1-204ENST00000430328 ZNF75DP51815 510 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 TYW1BQ6NUM6 668 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 PHKBQ93100 1093 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 MCF2L2Q86YR7 1114 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
RIF1-204ENST00000430328 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
RIF1-204ENST00000430328 PSDA5PKW4 1024 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms