RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 RPAINQ86UA6 219 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 JADE2Q9NQC1 790 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 FAM217BQ9NTX9 383 aaPredicted RBP12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 DUSP10Q9Y6W6 482 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 OVOS2A0A0G2JMS6 1433 aa12.46□□□□□ -0.42
SEMA4D-209ENST00000429836 RCCD1A6NED2 376 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 B4E1Z4 1266 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 SH2B2O14492 632 aaPredicted RBP12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 FSBPO95073 299 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 ELF1P32519 619 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 CMTR1Q8N1G2 835 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 LRRC1Q9BTT6 524 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 LACRTQ9GZZ8 138 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 MCM8Q9UJA3 840 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 ITIH6Q6UXX5 1313 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 ECM29Q5VYK3 1845 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 GOLGA8KD6RF30 607 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 ZBTB43O43298 467 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 HDGFP51858 240 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 COPB1P53618 953 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 GUCY1A3Q02108 690 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 CKAP4Q07065 602 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 IP6K1Q92551 441 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 HAUS4Q9H6D7 363 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 SMARCAL1Q9NZC9 954 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 RGPD2P0DJD1 1756 aa12.45□□□□□ -0.42
SEMA4D-209ENST00000429836 TTC26A0AVF1 554 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 ADORA1P30542 326 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 APBA1Q02410 837 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 DDR1Q08345 913 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 SCARF1Q14162 830 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 NEDD9Q14511 834 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 B4GALNT4Q76KP1 1039 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 KIAA1328Q86T90 577 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 OXER1Q8TDS5 423 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 PAGE5Q96GU1 130 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 PUS3Q9BZE2 481 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 BLZF1Q9H2G9 400 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 MAPK8IP1Q9UQF2 711 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 KDM6AO15550 1401 aaPredicted RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 GPAA1O43292 621 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 UBXN1Q04323 297 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 AMOTL1Q8IY63 956 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 CARD10Q9BWT7 1032 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 A1CFQ9NQ94 594 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 CHUKO15111 745 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 KRT14P02533 472 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 IDEP14735 1019 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 SEC24CP53992 1094 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 SSRP1Q08945 709 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 SMCR8Q8TEV9 937 aaPredicted RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 PSMB7Q99436 277 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 KLC4Q9NSK0 619 aa12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 SRPRBQ9Y5M8 271 aaKnown RBP12.44□□□□□ -0.42
SEMA4D-209ENST00000429836 UBR1Q8IWV7 1749 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 FRMD3A2A2Y4 597 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 MMP1P03956 469 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 SSBP05455 408 aaKnown RBP eCLIP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 NAA35Q5VZE5 725 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 RRAGBQ5VZM2 374 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 THEMISQ8N1K5 641 aaPredicted RBP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 MIEF2Q96C03 454 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 RNPC3Q96LT9 517 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 RUFY1Q96T51 708 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 EHD2Q9NZN4 543 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 VPS54Q9P1Q0 977 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 MARF1Q9Y4F3 1742 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 MST1RQ04912 1400 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 MAP3K15Q6ZN16 1313 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 C21orf2O43822 256 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 OPA1O60313 960 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 PAX7P23759 505 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 NF2P35240 595 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 NAP1L1P55209 391 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 SATB1Q01826 763 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 TTF1Q15361 905 aaPredicted RBP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 SAFBQ15424 915 aaKnown RBP eCLIP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 CEP57Q86XR8 500 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 KIRREL3Q8IZU9 778 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 CABP5Q9NP86 173 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 LIMA1Q9UHB6 759 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 ODF2LQ9ULJ1 636 aa12.43□□□□□ -0.42
SEMA4D-209ENST00000429836 LMO7Q8WWI1 1683 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 KCNJ18B7U540 433 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 PDHBP11177 359 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 ZAP70P43403 619 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 SKOR1P84550 965 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 FOXO4P98177 505 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 CYP27A1Q02318 531 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 IFT88Q13099 833 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 NNTQ13423 1086 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 SF3B2Q13435 895 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 KCNJ12Q14500 433 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 CCDC40Q4G0X9 1142 aa12.42□□□□□ -0.42
SEMA4D-209ENST00000429836 PREPLQ4J6C6 727 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms