RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 VAV2P52735 878 aa14.17□□□□□ -0.14
CPNE4-201ENST00000429747 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
CPNE4-201ENST00000429747 RGS22Q8NE09 1264 aa14.17□□□□□ -0.14
CPNE4-201ENST00000429747 CTDP1Q9Y5B0 961 aaPredicted RBP14.17□□□□□ -0.14
CPNE4-201ENST00000429747 C6orf229H3BNL8 230 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 COPB1P53618 953 aaKnown RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 GSDMAQ96QA5 445 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 PLEKHA4Q9H4M7 779 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 SAP30BPQ9UHR5 308 aaKnown RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 NEDD4P46934 1319 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 SLFN14P0C7P3 912 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 LIFRP42702 1097 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 HNRNPH2P55795 449 aaKnown RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 KRT79Q5XKE5 535 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 RBM43Q6ZSC3 357 aaKnown RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 TTLL11Q8NHH1 800 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 SECISBP2LQ93073 1101 aaKnown RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 FAM207AQ9NSI2 230 aaPredicted RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 KIF20BQ96Q89 1820 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 PRR29P0C7W0 189 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 PTPREP23469 700 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 TXKP42681 527 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 SND1Q7KZF4 910 aaKnown RBP eCLIP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 CRACR2BQ8N4Y2 399 aaPredicted RBP14.16□□□□□ -0.14
CPNE4-201ENST00000429747 ADGRL3Q9HAR2 1447 aa14.16□□□□□ -0.14
CPNE4-201ENST00000429747 CCNT1O60563 726 aaKnown RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 ATP2C2O75185 946 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 DDB1Q16531 1140 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 TTC31Q49AM3 519 aaPredicted RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 NYAP1Q6ZVC0 841 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 GPKOWQ92917 476 aaPredicted RBP eCLIP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 SETDB2Q96T68 719 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 SRPRBQ9Y5M8 271 aaKnown RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 PREX1Q8TCU6 1659 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 CCDC151A5D8V7 595 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 GOLGA6CA6NDK9 693 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 PPP1R12BO60237 982 aaPredicted RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 ZMYND10O75800 440 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 GOLGA6DP0CG33 693 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 TFAP4Q01664 338 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 WDR24Q96S15 920 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 IRX2Q9BZI1 471 aaPredicted RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 GOLGA6AQ9NYA3 693 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 CYP2D7A0A087X1C5 515 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 GNA11P29992 359 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 RASGRF1Q13972 1273 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 DYMQ7RTS9 669 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 RRP36Q96EU6 259 aaKnown RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 UTYO14607 1347 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 TRAF5O00463 557 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 ARID4AP29374 1257 aaPredicted RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 PARP10Q53GL7 1025 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 METTL16Q86W50 562 aaKnown RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 OXER1Q8TDS5 423 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 UIMC1Q96RL1 719 aa14.15□□□□□ -0.14
CPNE4-201ENST00000429747 RNF26Q9BY78 433 aaPredicted RBP14.15□□□□□ -0.14
CPNE4-201ENST00000429747 TECPR2O15040 1411 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 CLTCQ00610 1675 aaKnown RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 GOLGA6BA6NDN3 693 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 GTPBP6O43824 516 aaPredicted RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 RPN1P04843 607 aaKnown RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 MAGEA1P43355 309 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 HLFQ16534 295 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 MICALCLQ6ZW33 695 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 SV2BQ7L1I2 683 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 RASGRP4Q8TDF6 673 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 TEX33O43247 280 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 ATP8B1O43520 1251 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 LDHBP07195 334 aaKnown RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 HIBADHP31937 336 aaKnown RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 GTF2A1P52655 376 aaPredicted RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 MTF1Q14872 753 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 INF2Q27J81 1249 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 CFAP58Q5T655 872 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 FAN1Q9Y2M0 1017 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 PALLDQ8WX93 1383 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 F8W031 263 aaPredicted RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 SCG2P13521 617 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 PICALMQ13492 652 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 CC2D1AQ6P1N0 951 aaPredicted RBP14.14□□□□□ -0.15
CPNE4-201ENST00000429747 C2CD5Q86YS7 1000 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 PLCD3Q8N3E9 789 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 GPATCH11Q8N954 259 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 LRRC27Q9C0I9 530 aa14.14□□□□□ -0.15
CPNE4-201ENST00000429747 C8orf74Q6P047 294 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 TRMT1LQ7Z2T5 733 aaKnown RBP14.13□□□□□ -0.15
CPNE4-201ENST00000429747 RPGRQ92834 1020 aaKnown RBP14.13□□□□□ -0.15
CPNE4-201ENST00000429747 HAUS4Q9H6D7 363 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 ANTXR2P58335 489 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 DYNLL1P63167 89 aaKnown RBP14.13□□□□□ -0.15
CPNE4-201ENST00000429747 BLIDQ8IZY5 108 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 H7C1D1 291 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 GUCY1A2P33402 732 aa14.13□□□□□ -0.15
CPNE4-201ENST00000429747 CHRNDQ07001 517 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms