RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 HECW2Q9P2P5 1572 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 ANO9A1A5B4 782 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 LSM1O15116 133 aaKnown RBP8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 KRT2P35908 639 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 PDE1BQ01064 536 aa8.33□□□□□ -1.08
SYNPO2-202ENST00000429713 FSBPO95073 299 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 GSCP56915 257 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 CXorf38Q8TB03 319 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 EDC4Q6P2E9 1401 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 ATP10AO60312 1499 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 LMOD1P29536 600 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 PARP9Q8IXQ6 854 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 PANX2Q96RD6 677 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 KRT23Q9C075 422 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 DDR1Q08345 913 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 SLC44A4Q53GD3 710 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 FGD4Q96M96 766 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 LRRC2Q9BYS8 371 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 ACADSP16219 412 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 ESRRGP62508 458 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 RASGRF1Q13972 1273 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 CYLC2Q14093 348 aaPredicted RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 CFAP157Q5JU67 520 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 TCEANC2Q96MN5 208 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 YTHDC2Q9H6S0 1430 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 GSPT1P15170 499 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 SPATA21Q7Z572 469 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 PPCSQ9HAB8 311 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 IFNKQ9P0W0 207 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 FRMD3A2A2Y4 597 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 ACADVLP49748 655 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 NEK2P51955 445 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 GAS2L3Q86XJ1 694 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 MYOM1P52179 1685 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 ATP2A2P16615 1042 aaKnown RBP8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 KLC1Q07866 573 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 ZNF449Q6P9G9 518 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 MMRN2Q9H8L6 949 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 USP16Q9Y5T5 823 aa8.32□□□□□ -1.08
SYNPO2-202ENST00000429713 SETBP1Q9Y6X0 1596 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 MYCNP04198 464 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 NOP14P78316 857 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 MAP3K12Q12852 859 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 PKP1Q13835 747 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 TSC22D1Q15714 1073 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 OTUD7AQ8TE49 926 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 RAB34Q9BZG1 259 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 DYTNA2CJ06 578 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 SEMA3EO15041 775 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 HSPA6P17066 643 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 CACTINQ8WUQ7 758 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 TMCO1Q9UM00 188 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 FAF1Q9UNN5 650 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 CAMSAP1Q5T5Y3 1602 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 ACEP12821 1306 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 IFIT3O14879 490 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 GAS8O95995 478 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 EIF4A2Q14240 407 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 HSP90AA4PQ58FG1 418 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 UBE3BQ7Z3V4 1068 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 PNMA8AQ86V59 439 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 A0A087WZG4 1122 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 NOP2P46087 812 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 CUL4AQ13619 759 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 RIOK1Q9BRS2 568 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 RASGRF2O14827 1237 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 IFIT5Q13325 482 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 KRR1Q13601 381 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 CUL4BQ13620 913 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 RASIP1Q5U651 963 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC82Q8N4S0 544 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 CORO1CQ9ULV4 474 aaPredicted RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 AKAP12Q02952 1782 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 ERVK-7P63135 1459 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 IARSP41252 1262 aaKnown RBP8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 UNC45AQ9H3U1 944 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 MAN1A1P33908 653 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 ZHX3Q9H4I2 956 aa8.31□□□□□ -1.08
SYNPO2-202ENST00000429713 UGGT1Q9NYU2 1555 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 MINDY4BA8MYZ0 360 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 XPO1O14980 1071 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 S100A1P23297 94 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 TTF1Q15361 905 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 PPP4R3AQ6IN85 833 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 ARHGAP22Q7Z5H3 698 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 MCF2L2Q86YR7 1114 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 BRF1Q92994 677 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 CCDC85AQ96PX6 553 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 SYNCQ9H7C4 482 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 RPS6KB1P23443 525 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 MARCKSP29966 332 aaPredicted RBP8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 TTLL7Q6ZT98 887 aa8.3□□□□□ -1.08
SYNPO2-202ENST00000429713 TEKT1Q969V4 418 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms