RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 CCDC8Q9H0W5 538 aaPredicted RBP11.12□□□□□ -0.63
NEDD1-203ENST00000429527 IL1RAPL2Q9NP60 686 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 KIF3AQ9Y496 699 aa11.12□□□□□ -0.63
NEDD1-203ENST00000429527 PTPRAP18433 802 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 TYRO3Q06418 890 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 IQCB1Q15051 598 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 SLFNL1Q499Z3 407 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 WRNIP1Q96S55 665 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 LRP2BPQ9P2M1 347 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-203ENST00000429527 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-203ENST00000429527 DHX8Q14562 1220 aaKnown RBP11.11□□□□□ -0.63
NEDD1-203ENST00000429527 RNF20Q5VTR2 975 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 ZSCAN25Q6NSZ9 544 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 RAI14Q9P0K7 980 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 SMTNL1A8MU46 457 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 IRF6O14896 467 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 FKTNO75072 461 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 IFIT2P09913 472 aaKnown RBP11.11□□□□□ -0.63
NEDD1-203ENST00000429527 PDE6AP16499 860 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 TEX11Q8IYF3 940 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 TNS4Q8IZW8 715 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 LEO1Q8WVC0 666 aaPredicted RBP11.11□□□□□ -0.63
NEDD1-203ENST00000429527 NOL10Q9BSC4 688 aaKnown RBP11.11□□□□□ -0.63
NEDD1-203ENST00000429527 RCOR1Q9UKL0 485 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 WDR19Q8NEZ3 1342 aa11.11□□□□□ -0.63
NEDD1-203ENST00000429527 ZNF75DP51815 510 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 CACNB3P54284 484 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 JAKMIP1Q96N16 626 aaKnown RBP11.1□□□□□ -0.63
NEDD1-203ENST00000429527 PAG1Q9NWQ8 432 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 ABCF2Q9UG63 623 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 SYNPO2Q9UMS6 1093 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 APBB1O00213 710 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 TUBB4AP04350 444 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 ZFYP08048 801 aaPredicted RBP11.1□□□□□ -0.63
NEDD1-203ENST00000429527 CAP2P40123 477 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 NYAP1Q6ZVC0 841 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
NEDD1-203ENST00000429527 RNF214Q8ND24 703 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 ERO1AQ96HE7 468 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 NUP62CLQ9H1M0 184 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 DNAJC18Q9H819 358 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 ZMYM6O95789 1325 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 SBK1Q52WX2 424 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 C17orf99Q6UX52 265 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 GDPD2Q9HCC8 539 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 ATP8A2Q9NTI2 1148 aa11.1□□□□□ -0.63
NEDD1-203ENST00000429527 SCAF8Q9UPN6 1271 aaKnown RBP11.1□□□□□ -0.63
NEDD1-203ENST00000429527 PLIN4Q96Q06 1357 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 PFKFB2O60825 505 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 NT5C2P49902 561 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 NMIQ13287 307 aaPredicted RBP11.09□□□□□ -0.63
NEDD1-203ENST00000429527 CWC27Q6UX04 472 aaKnown RBP11.09□□□□□ -0.63
NEDD1-203ENST00000429527 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
NEDD1-203ENST00000429527 CREBRFQ8IUR6 639 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 ENGASEQ8NFI3 743 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 GTF3C2Q8WUA4 911 aaPredicted RBP11.09□□□□□ -0.63
NEDD1-203ENST00000429527 NEDD4P46934 1319 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
NEDD1-203ENST00000429527 LBX2Q6XYB7 198 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 CCDC83Q8IWF9 413 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 PDCL2Q8N4E4 241 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 CHMP4CQ96CF2 233 aa11.09□□□□□ -0.63
NEDD1-203ENST00000429527 KIF20AO95235 890 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 CYP7A1P22680 504 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 INPP5BP32019 993 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 EXOSC10Q01780 885 aaKnown RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 KBTBD3Q8NAB2 608 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 PGBD1Q96JS3 809 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 CBX8Q9HC52 389 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 ZFYVE28Q9HCC9 887 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 SWAP70Q9UH65 585 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 NID2Q14112 1375 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 CCL15-CCL14A0A0B4J2E2 113 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 TLR2O60603 784 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 BCRP11274 1271 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 HOXA7P31268 230 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 CCL15Q16663 113 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 FBXO46Q6PJ61 603 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 ARMC5Q96C12 935 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 ABHD8Q96I13 439 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 MCOLN1Q9GZU1 580 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 MORC2Q9Y6X9 1032 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 U3KPZ7 1027 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 BAZ2AQ9UIF9 1905 aaKnown RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 FAM237AA0A1B0GTK4 181 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 LIG1P18858 919 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 ELOA2Q8IYF1 753 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 MAGEB6Q8N7X4 407 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 DSCC1Q9BVC3 393 aa11.08□□□□□ -0.64
NEDD1-203ENST00000429527 TTC12Q9H892 705 aaPredicted RBP11.08□□□□□ -0.64
NEDD1-203ENST00000429527 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
NEDD1-203ENST00000429527 C19orf81C9J6K1 198 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms