RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 PODNQ7Z5L7 613 aa22.69■■□□□ 1.22
CASC4-203ENST00000429162 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.69■■□□□ 1.22
CASC4-203ENST00000429162 ATP2B1P20020 1258 aa22.69■■□□□ 1.22
CASC4-203ENST00000429162 NLRP12P59046 1061 aa22.69■■□□□ 1.22
CASC4-203ENST00000429162 SARM1Q6SZW1 724 aa22.69■■□□□ 1.22
CASC4-203ENST00000429162 PLA2G4DQ86XP0 818 aa22.69■■□□□ 1.22
CASC4-203ENST00000429162 BPIFA3Q9BQP9 254 aa22.69■■□□□ 1.22
CASC4-203ENST00000429162 FAM205CA6NFA0 338 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 ZNF75DP51815 510 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 SLC15A2Q16348 729 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 HHIPL2Q6UWX4 724 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 KRBA2Q6ZNG9 492 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 ELOA2Q8IYF1 753 aaPredicted RBP22.68■■□□□ 1.22
CASC4-203ENST00000429162 TRIM5Q9C035 493 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 STK32BQ9NY57 414 aa22.68■■□□□ 1.22
CASC4-203ENST00000429162 HOOK1Q9UJC3 728 aaKnown RBP22.68■■□□□ 1.22
CASC4-203ENST00000429162 TRAPPC10P48553 1259 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 PICALMQ13492 652 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 DHX40Q8IX18 779 aaKnown RBP22.67■■□□□ 1.22
CASC4-203ENST00000429162 STAG2Q8N3U4 1231 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 CNNM3Q8NE01 707 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 TEKT1Q969V4 418 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 ANO8Q9HCE9 1232 aaPredicted RBP22.67■■□□□ 1.22
CASC4-203ENST00000429162 ADAMTSL1Q8N6G6 1762 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 PALM3A6NDB9 673 aaPredicted RBP22.67■■□□□ 1.22
CASC4-203ENST00000429162 TOP1P11387 765 aaKnown RBP22.67■■□□□ 1.22
CASC4-203ENST00000429162 EARS2Q5JPH6 523 aaKnown RBP22.67■■□□□ 1.22
CASC4-203ENST00000429162 FAM177A1Q8N128 213 aaPredicted RBP22.67■■□□□ 1.22
CASC4-203ENST00000429162 TUBE1Q9UJT0 475 aa22.67■■□□□ 1.22
CASC4-203ENST00000429162 A0A087WWV3 80 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 FKBP1AP62942 108 aaKnown RBP22.66■■□□□ 1.22
CASC4-203ENST00000429162 DPCR1Q3MIW9 517 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 TTC38Q5R3I4 469 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 CCDC148Q8NFR7 591 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 PIBF1Q8WXW3 757 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 CNKSR1Q969H4 720 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 USP40Q9NVE5 1235 aa22.66■■□□□ 1.22
CASC4-203ENST00000429162 AOPEPQ8N6M6 819 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 FERMT2Q96AC1 680 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 MXD3Q9BW11 206 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 MYO3BQ8WXR4 1341 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 SLX4Q8IY92 1834 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 CDC25BP30305 580 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 NOVP48745 357 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 GABPAQ06546 454 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 KIAA2012Q0VF49 1180 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 LONRF3Q496Y0 759 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 SPZ1Q9BXG8 430 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 SWAP70Q9UH65 585 aa22.65■■□□□ 1.22
CASC4-203ENST00000429162 C10orf71Q711Q0 1435 aa22.64■■□□□ 1.22
CASC4-203ENST00000429162 MYH8P13535 1937 aa22.64■■□□□ 1.21
CASC4-203ENST00000429162 GRIN1Q05586 938 aa22.64■■□□□ 1.21
CASC4-203ENST00000429162 EZH2Q15910 746 aaKnown RBP22.64■■□□□ 1.21
CASC4-203ENST00000429162 BLIDQ8IZY5 108 aa22.64■■□□□ 1.21
CASC4-203ENST00000429162 SPC24Q8NBT2 197 aa22.64■■□□□ 1.21
CASC4-203ENST00000429162 CEP95Q96GE4 821 aa22.64■■□□□ 1.21
CASC4-203ENST00000429162 DBNDD1Q9H9R9 158 aa22.64■■□□□ 1.21
CASC4-203ENST00000429162 BIN1O00499 593 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 PARP1P09874 1014 aaKnown RBP22.63■■□□□ 1.21
CASC4-203ENST00000429162 SCNN1DP51172 638 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 GALNT17Q6IS24 598 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 METTL16Q86W50 562 aaKnown RBP22.63■■□□□ 1.21
CASC4-203ENST00000429162 CAMKK2Q96RR4 588 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 OSBPL5Q9H0X9 879 aaPredicted RBP22.63■■□□□ 1.21
CASC4-203ENST00000429162 CSRNP2Q9H175 543 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 DDX4Q9NQI0 724 aaKnown RBP22.63■■□□□ 1.21
CASC4-203ENST00000429162 PCDHA4Q9UN74 947 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 SPECC1Q5M775 1068 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 STRIP1Q5VSL9 837 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 GPKOWQ92917 476 aaPredicted RBP eCLIP22.63■■□□□ 1.21
CASC4-203ENST00000429162 MTMR7Q9Y216 660 aa22.63■■□□□ 1.21
CASC4-203ENST00000429162 ZNF646O15015 1829 aaPredicted RBP22.62■■□□□ 1.21
CASC4-203ENST00000429162 HLA-DOAP06340 250 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 CRKP46108 304 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 TPM4P67936 248 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 PNOCQ13519 176 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 KANK3Q6NY19 840 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 CDC42EP5Q6NZY7 148 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 PIK3AP1Q6ZUJ8 805 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 DRC7Q8IY82 874 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 DAGLBQ8NCG7 672 aa22.62■■□□□ 1.21
CASC4-203ENST00000429162 KLRF2D3W0D1 207 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 CYTH3O43739 400 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 ECE2O60344 883 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 VEGFAP15692 232 aaPredicted RBP22.61■■□□□ 1.21
CASC4-203ENST00000429162 SMARCA1P28370 1054 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 ATP2C1P98194 919 aaPredicted RBP22.61■■□□□ 1.21
CASC4-203ENST00000429162 APOBEC3HQ6NTF7 200 aaKnown RBP22.61■■□□□ 1.21
CASC4-203ENST00000429162 CCDC34Q96HJ3 373 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 MRFAP1L1Q96HT8 127 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 ZDHHC15Q96MV8 337 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 MRIQ9BWK5 157 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 TTC12Q9H892 705 aaPredicted RBP22.61■■□□□ 1.21
CASC4-203ENST00000429162 BARHL2Q9NY43 387 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 SERPINB13Q9UIV8 391 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 SMTNL1A8MU46 457 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 POLR2DO15514 142 aaKnown RBP22.61■■□□□ 1.21
CASC4-203ENST00000429162 CHRNA5P30532 468 aa22.61■■□□□ 1.21
CASC4-203ENST00000429162 HDLBPQ00341 1268 aaKnown RBP22.61■■□□□ 1.21
CASC4-203ENST00000429162 EN1Q05925 392 aaPredicted RBP22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms