RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FLAD1Q8NFF5 587 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 DEPTORQ8TB45 409 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 MAIP1Q8WWC4 291 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 AATKQ6ZMQ8 1374 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 RHOXF2BP0C7M4 288 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 USH1GQ495M9 461 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 CCDC62Q6P9F0 684 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 MICALL1Q8N3F8 863 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 SPATA5Q8NB90 893 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 ATP2A3Q93084 1043 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 RHOXF2Q9BQY4 288 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 NDUFB9Q9Y6M9 179 aa9.9□□□□□ -0.82
CTNND1-208ENST00000428599 GPAA1O43292 621 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 MAN1A1P33908 653 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 RPS8P62241 208 aaKnown RBP9.9□□□□□ -0.83
CTNND1-208ENST00000428599 NONOQ15233 471 aaKnown RBP eCLIP9.9□□□□□ -0.83
CTNND1-208ENST00000428599 C8orf34Q49A92 452 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 ZBTB8OSQ8IWT0 167 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 METTL13Q8N6R0 699 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 TET3O43151 1660 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 PRR36Q9H6K5 1346 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 MAP3K4Q9Y6R4 1608 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 TYRO3Q06418 890 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 HHATQ5VTY9 493 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 PDZD4Q76G19 769 aaPredicted RBP9.9□□□□□ -0.83
CTNND1-208ENST00000428599 PAGR1Q9BTK6 254 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 ASIC3Q9UHC3 531 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 ASAP1Q9ULH1 1129 aa9.9□□□□□ -0.83
CTNND1-208ENST00000428599 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.83
CTNND1-208ENST00000428599 TRIM37O94972 964 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 CFBP00751 764 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 DNAJC21Q5F1R6 531 aaKnown RBP9.89□□□□□ -0.83
CTNND1-208ENST00000428599 ZNF772Q68DY9 489 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-208ENST00000428599 ARHGAP24Q8N264 748 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 FNBP4Q8N3X1 1017 aaPredicted RBP9.89□□□□□ -0.83
CTNND1-208ENST00000428599 SNX29Q8TEQ0 813 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 TBC1D22AQ8WUA7 517 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 NUP58Q9BVL2 599 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 CAPN9O14815 690 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 PPIP5K2O43314 1243 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 SH2D4BQ5SQS7 431 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 FAM182BQ5T319 152 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 TRIM50Q86XT4 487 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 MIPOL1Q8TD10 442 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 IFNKQ9P0W0 207 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 VPS18Q9P253 973 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTNND1-208ENST00000428599 WDR17Q8IZU2 1322 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 KDRP35968 1356 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 MYL5Q02045 173 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 DCAF15Q66K64 600 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 SYCE1Q8N0S2 351 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 DCPSQ96C86 337 aaKnown RBP9.89□□□□□ -0.83
CTNND1-208ENST00000428599 ADPGKQ9BRR6 497 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.89□□□□□ -0.83
CTNND1-208ENST00000428599 LRWD1Q9UFC0 647 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 TNNI1P19237 187 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 RXRBP28702 533 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 ZAP70P43403 619 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 RPS6KA2Q15349 733 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 CYP26C1Q6V0L0 522 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 CHURC1Q8WUH1 139 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 IWS1Q96ST2 819 aa9.89□□□□□ -0.83
CTNND1-208ENST00000428599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.89□□□□□ -0.839e-8■□□□□ 10.6
CTNND1-208ENST00000428599 GCNT3O95395 438 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 CRKLP46109 303 aaKnown RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 NOLC1Q14978 699 aaKnown RBP eCLIP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 ARHGEF16Q5VV41 709 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 CSGALNACT2Q8N6G5 542 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 RSRC1Q96IZ7 334 aaKnown RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 FAM227BQ96M60 508 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 MRPL44Q9H9J2 332 aaKnown RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 USH1CQ9Y6N9 552 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 SYNMO15061 1565 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 CPA1P15085 419 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 ITKQ08881 620 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 USPL1Q5W0Q7 1092 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 C8orf74Q6P047 294 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 MCUR1Q96AQ8 359 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 BAG1Q99933 345 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 BCAP29Q9UHQ4 241 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 BCS1LQ9Y276 419 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 TNNC2P02585 160 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 KRT81Q14533 505 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 SLC9C1Q4G0N8 1177 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 USP26Q9BXU7 913 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 TYW5A2RUC4 315 aaKnown RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 PRDM1O75626 825 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 GBP1P32455 592 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 ZNF131P52739 623 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 TCP10Q12799 353 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 NAA25Q14CX7 972 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 DIXDC1Q155Q3 683 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 CALCRLQ16602 461 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 HERC4Q5GLZ8 1057 aaPredicted RBP9.88□□□□□ -0.83
CTNND1-208ENST00000428599 HDXQ7Z353 690 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 KBTBD3Q8NAB2 608 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 HAUS8Q9BT25 410 aa9.88□□□□□ -0.83
CTNND1-208ENST00000428599 XPAP23025 273 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms