RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
SNX13-203ENST00000428135 EZH2Q15910 746 aaKnown RBP10.86□□□□□ -0.67
SNX13-203ENST00000428135 GIGYF2Q6Y7W6 1299 aaKnown RBP10.86□□□□□ -0.67
SNX13-203ENST00000428135 SYNE4Q8N205 404 aa10.86□□□□□ -0.67
SNX13-203ENST00000428135 IGSF22Q8N9C0 903 aa10.86□□□□□ -0.67
SNX13-203ENST00000428135 CALUO43852 315 aaPredicted RBP10.85□□□□□ -0.67
SNX13-203ENST00000428135 MYL5Q02045 173 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 FAM160A1Q05DH4 1040 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 HLFQ16534 295 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 TRIM31Q9BZY9 425 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 ANTXR1Q9H6X2 564 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 AS3MTQ9HBK9 375 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 RNF181Q9P0P0 153 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 CHRNA5P30532 468 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 NKX1-1Q15270 411 aaPredicted RBP10.85□□□□□ -0.67
SNX13-203ENST00000428135 TICAM2Q86XR7 235 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 MSANTD4Q8NCY6 345 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 CAMSAP1Q5T5Y3 1602 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 TNKSO95271 1327 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 SYNRGQ9UMZ2 1314 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 A0A0G2JLW4 131 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 ZNF202O95125 648 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 FGAP02671 866 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 PCCAP05165 728 aaPredicted RBP10.85□□□□□ -0.67
SNX13-203ENST00000428135 XRCC6P12956 609 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX13-203ENST00000428135 CACNB3P54284 484 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 ABCB5Q2M3G0 1257 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 KRT25Q7Z3Z0 450 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 CCPG1Q9ULG6 757 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 SLC8A3P57103 927 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
SNX13-203ENST00000428135 ST7Q9NRC1 585 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 CYP2D7A0A087X1C5 515 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 PRKAB2O43741 272 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 PRPF6O94906 941 aaKnown RBP10.85□□□□□ -0.67
SNX13-203ENST00000428135 HSPD1P10809 573 aaKnown RBP10.85□□□□□ -0.67
SNX13-203ENST00000428135 SF3A3Q12874 501 aaKnown RBP eCLIP10.85□□□□□ -0.67
SNX13-203ENST00000428135 HAUS7Q99871 368 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 TXNDC16Q9P2K2 825 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 FAM169AQ9Y6X4 670 aa10.85□□□□□ -0.67
SNX13-203ENST00000428135 SNAP23O00161 211 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 CAVIN2O95810 425 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 TTLL6Q8N841 843 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 RASGRP4Q8TDF6 673 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 CHURC1Q8WUH1 139 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 CETN3O15182 167 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 GSPT1P15170 499 aaKnown RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 SEPT14Q6ZU15 432 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 LMBR1Q8WVP7 490 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 CEP152O94986 1710 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 FAM135BQ49AJ0 1406 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 GABPAQ06546 454 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 KIF22Q14807 665 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 SLFN13Q68D06 897 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 DPP9Q86TI2 863 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 KCNK9Q9NPC2 374 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 NLRC4Q9NPP4 1024 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 E7EVH7 732 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 IL6STP40189 918 aaPredicted RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 PAK1Q13153 545 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 DIXDC1Q155Q3 683 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 ASIC2Q16515 512 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 ARHGEF1Q92888 912 aaKnown RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 PIM2Q9P1W9 311 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 SERTAD1Q9UHV2 236 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 AKR1B15C9JRZ8 316 aaPredicted RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 XKR9Q5GH70 373 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 CEP63Q96MT8 703 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 SPC25Q9HBM1 224 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 PPANQ9NQ55 473 aaKnown RBP10.84□□□□□ -0.67
SNX13-203ENST00000428135 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
SNX13-203ENST00000428135 FBXO11Q86XK2 927 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 NELFBQ8WX92 580 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 KIFAP3Q92845 792 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 BAG1Q99933 345 aaPredicted RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 ZNF277Q9NRM2 450 aaPredicted RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.83□□□□□ -0.68
SNX13-203ENST00000428135 M0R2C6 588 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 SUSD4Q5VX71 490 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 C17orf53Q8N3J3 647 aaPredicted RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 DEPTORQ8TB45 409 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 SPON1Q9HCB6 807 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 KDM5AP29375 1690 aaKnown RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 TNS3Q68CZ2 1445 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 PDE8BO95263 885 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 GPBP1Q86WP2 473 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 FAM207AQ9NSI2 230 aaPredicted RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 ANKFY1Q9P2R3 1169 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 DCAF15Q66K64 600 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 UBLCP1Q8WVY7 318 aaPredicted RBP10.83□□□□□ -0.68
SNX13-203ENST00000428135 GOLGA1Q92805 767 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 DYNLL2Q96FJ2 89 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 CLIC6Q96NY7 704 aa10.83□□□□□ -0.68
SNX13-203ENST00000428135 MMS19Q96T76 1030 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms