RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ZBTB47Q9UFB7 747 aaPredicted RBP22.06■■□□□ 1.12
PSPC1-202ENST00000427943 MINDY4BA8MYZ0 360 aa22.05■■□□□ 1.12
PSPC1-202ENST00000427943 WDR78Q5VTH9 848 aa22.05■■□□□ 1.12
PSPC1-202ENST00000427943 SPICE1Q8N0Z3 855 aa22.05■■□□□ 1.12
PSPC1-202ENST00000427943 SEC62Q99442 399 aaKnown RBP22.05■■□□□ 1.12
PSPC1-202ENST00000427943 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.05■■□□□ 1.12
PSPC1-202ENST00000427943 ALPK3Q96L96 1907 aa22.05■■□□□ 1.12
PSPC1-202ENST00000427943 ROBO3Q96MS0 1386 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 SGPL1O95470 568 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 TDO2P48775 406 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 ATP2B2Q01814 1243 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 HDAC1Q13547 482 aaPredicted RBP22.04■■□□□ 1.12
PSPC1-202ENST00000427943 LRRFIP1Q32MZ4 808 aaKnown RBP22.04■■□□□ 1.12
PSPC1-202ENST00000427943 SBK1Q52WX2 424 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 LBX2Q6XYB7 198 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 PLEKHH3Q7Z736 793 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 PAK6Q9NQU5 681 aaPredicted RBP22.04■■□□□ 1.12
PSPC1-202ENST00000427943 TMX2Q9Y320 296 aa22.04■■□□□ 1.12
PSPC1-202ENST00000427943 ZNF236Q9UL36 1845 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 APPP05067 770 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 CCNA1P78396 465 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 GIMAP6Q6P9H5 292 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 GCC1Q96CN9 775 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 SH2D4AQ9H788 454 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 VCPKMTQ9H867 229 aa22.03■■□□□ 1.12
PSPC1-202ENST00000427943 FARP2O94887 1054 aaPredicted RBP22.02■■□□□ 1.12
PSPC1-202ENST00000427943 EEF2P13639 858 aaKnown RBP22.02■■□□□ 1.12
PSPC1-202ENST00000427943 GNAT2P19087 354 aa22.02■■□□□ 1.12
PSPC1-202ENST00000427943 RASA1P20936 1047 aa22.02■■□□□ 1.12
PSPC1-202ENST00000427943 MORN1Q5T089 497 aa22.02■■□□□ 1.12
PSPC1-202ENST00000427943 TFRCP02786 760 aaKnown RBP22.01■■□□□ 1.11
PSPC1-202ENST00000427943 ZKSCAN1P17029 563 aaPredicted RBP22.01■■□□□ 1.11
PSPC1-202ENST00000427943 RGS2P41220 211 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 COG2Q14746 738 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 CCL14Q16627 93 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 SAMD1Q6SPF0 538 aaPredicted RBP22.01■■□□□ 1.11
PSPC1-202ENST00000427943 UBE2Q1Q7Z7E8 422 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 LPAR1Q92633 364 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 USP6NLQ92738 828 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 KANSL2Q9H9L4 492 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 MKNK2Q9HBH9 465 aa22.01■■□□□ 1.11
PSPC1-202ENST00000427943 ZNFX1Q9P2E3 1918 aaKnown RBP22.01■■□□□ 1.11
PSPC1-202ENST00000427943 FLOT1O75955 427 aa22■■□□□ 1.11
PSPC1-202ENST00000427943 XRCC5P13010 732 aaKnown RBP22■■□□□ 1.11
PSPC1-202ENST00000427943 ZMYM1Q5SVZ6 1142 aa22■■□□□ 1.11
PSPC1-202ENST00000427943 IFNL3Q8IZI9 196 aa22■■□□□ 1.11
PSPC1-202ENST00000427943 APBA2Q99767 749 aa22■■□□□ 1.11
PSPC1-202ENST00000427943 GNL3Q9BVP2 549 aaKnown RBP eCLIP22■■□□□ 1.11
PSPC1-202ENST00000427943 HMX1Q9NP08 348 aaPredicted RBP22■■□□□ 1.11
PSPC1-202ENST00000427943 RPTORQ8N122 1335 aa22■■□□□ 1.11
PSPC1-202ENST00000427943 CEP290O15078 2479 aa22■■□□□ 1.11
PSPC1-202ENST00000427943 WDR46O15213 610 aaKnown RBP21.99■■□□□ 1.11
PSPC1-202ENST00000427943 RAD21O60216 631 aa21.99■■□□□ 1.11
PSPC1-202ENST00000427943 PRKAR2AP13861 404 aaKnown RBP21.99■■□□□ 1.11
PSPC1-202ENST00000427943 MAP2K5Q13163 448 aa21.99■■□□□ 1.11
PSPC1-202ENST00000427943 CCDC129Q6ZRS4 1044 aa21.99■■□□□ 1.11
PSPC1-202ENST00000427943 ATG4CQ96DT6 458 aa21.99■■□□□ 1.11
PSPC1-202ENST00000427943 PATL2C9JE40 543 aaKnown RBP21.98■■□□□ 1.11
PSPC1-202ENST00000427943 PRDM1O75626 825 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 PTPREP23469 700 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 DSG3P32926 999 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 PDE1AP54750 535 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 EXOC6Q8TAG9 804 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 DPF3Q92784 378 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 MOV10L1Q9BXT6 1211 aaKnown RBP21.98■■□□□ 1.11
PSPC1-202ENST00000427943 LNPKQ9C0E8 428 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 CRISPLD2Q9H0B8 497 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 HOXC10Q9NYD6 342 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 STAP2Q9UGK3 403 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 IVNS1ABPQ9Y6Y0 642 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 PLXNA1Q9UIW2 1896 aa21.98■■□□□ 1.11
PSPC1-202ENST00000427943 PLS1Q14651 629 aa21.97■■□□□ 1.11
PSPC1-202ENST00000427943 MAP3K21Q5TCX8 1036 aa21.97■■□□□ 1.11
PSPC1-202ENST00000427943 TRMT44Q8IYL2 757 aaKnown RBP21.97■■□□□ 1.11
PSPC1-202ENST00000427943 SPATC1LQ9H0A9 340 aa21.97■■□□□ 1.11
PSPC1-202ENST00000427943 NAPBQ9H115 298 aa21.97■■□□□ 1.11
PSPC1-202ENST00000427943 GOPCQ9HD26 462 aa21.97■■□□□ 1.11
PSPC1-202ENST00000427943 SLC15A5A6NIM6 579 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 CACNB2Q08289 660 aaPredicted RBP21.96■■□□□ 1.11
PSPC1-202ENST00000427943 AAMPQ13685 434 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 GRB14Q14449 540 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 B4GALNT3Q6L9W6 998 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 DIS3LQ8TF46 1054 aaKnown RBP21.96■■□□□ 1.11
PSPC1-202ENST00000427943 EVI5LQ96CN4 794 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 HTATIP2Q9BUP3 242 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 NACAP1Q9BZK3 213 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 FBXO28Q9NVF7 368 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 FLRT1Q9NZU1 646 aa21.96■■□□□ 1.11
PSPC1-202ENST00000427943 H0YGN5 161 aa21.95■■□□□ 1.1
PSPC1-202ENST00000427943 FAM83BQ5T0W9 1011 aa21.95■■□□□ 1.1
PSPC1-202ENST00000427943 MB21D1Q8N884 522 aa21.95■■□□□ 1.1
PSPC1-202ENST00000427943 FOXP2O15409 715 aa21.94■■□□□ 1.1
PSPC1-202ENST00000427943 SLC34A2O95436 690 aa21.94■■□□□ 1.1
PSPC1-202ENST00000427943 ERCC3P19447 782 aa21.94■■□□□ 1.1
PSPC1-202ENST00000427943 CCND3P30281 292 aaPredicted RBP21.94■■□□□ 1.1
PSPC1-202ENST00000427943 SMC5Q8IY18 1101 aa21.94■■□□□ 1.1
PSPC1-202ENST00000427943 ZNF444Q8N0Y2 327 aaPredicted RBP21.94■■□□□ 1.1
PSPC1-202ENST00000427943 NPLOC4Q8TAT6 608 aa21.94■■□□□ 1.1
PSPC1-202ENST00000427943 PAWRQ96IZ0 340 aaKnown RBP21.94■■□□□ 1.1
PSPC1-202ENST00000427943 NUP88Q99567 741 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms