RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 PDE4BQ07343 736 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 COG2Q14746 738 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 CLEC10AQ8IUN9 316 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 PXYLP1Q8TE99 480 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 RNF208Q9H0X6 261 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 EPB41L4AQ9HCS5 686 aaPredicted RBP24.63■■□□□ 1.53
HSPG2-205ENST00000427897 GOPCQ9HD26 462 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 HELLSQ9NRZ9 838 aa24.63■■□□□ 1.53
HSPG2-205ENST00000427897 CCL5P13501 91 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 MTFR1Q15390 333 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 Q3C1V9 767 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 CCDC129Q6ZRS4 1044 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 SPICE1Q8N0Z3 855 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 NUDT12Q9BQG2 462 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 VCPKMTQ9H867 229 aa24.62■■□□□ 1.53
HSPG2-205ENST00000427897 NKX2-3Q8TAU0 364 aa24.61■■□□□ 1.53
HSPG2-205ENST00000427897 RASA1P20936 1047 aa24.6■■□□□ 1.53
HSPG2-205ENST00000427897 MCMDC2Q4G0Z9 681 aa24.6■■□□□ 1.53
HSPG2-205ENST00000427897 PLEKHH3Q7Z736 793 aa24.6■■□□□ 1.53
HSPG2-205ENST00000427897 SOCS4Q8WXH5 440 aa24.6■■□□□ 1.53
HSPG2-205ENST00000427897 WDR46O15213 610 aaKnown RBP24.59■■□□□ 1.53
HSPG2-205ENST00000427897 PRDM1O75626 825 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 FLOT1O75955 427 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 INHAP05111 366 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 CYP2B6P20813 491 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 PPARAQ07869 468 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 TICAM2Q86XR7 235 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 SIAH1Q8IUQ4 282 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 PLEKHM2Q8IWE5 1019 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 IVNS1ABPQ9Y6Y0 642 aa24.59■■□□□ 1.53
HSPG2-205ENST00000427897 RBBP6Q7Z6E9 1792 aaKnown RBP24.59■■□□□ 1.53
HSPG2-205ENST00000427897 ROBO3Q96MS0 1386 aa24.58■■□□□ 1.53
HSPG2-205ENST00000427897 SPDYE16A6NNV3 312 aaPredicted RBP24.58■■□□□ 1.53
HSPG2-205ENST00000427897 TSPY3P0CV98 308 aa24.58■■□□□ 1.53
HSPG2-205ENST00000427897 TSPY8P0CW00 308 aa24.58■■□□□ 1.53
HSPG2-205ENST00000427897 GPR142Q7Z601 462 aa24.58■■□□□ 1.53
HSPG2-205ENST00000427897 PORCNQ9H237 461 aa24.58■■□□□ 1.53
HSPG2-205ENST00000427897 MFAP1P55081 439 aaKnown RBP24.57■■□□□ 1.52
HSPG2-205ENST00000427897 PLS1Q14651 629 aa24.57■■□□□ 1.52
HSPG2-205ENST00000427897 LBX2Q6XYB7 198 aa24.57■■□□□ 1.52
HSPG2-205ENST00000427897 CLIP2Q9UDT6 1046 aa24.57■■□□□ 1.52
HSPG2-205ENST00000427897 GJD2Q9UKL4 321 aa24.57■■□□□ 1.52
HSPG2-205ENST00000427897 GJB1P08034 283 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 RGS2P41220 211 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 KIAA1755Q5JYT7 1200 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 FAM227BQ96M60 508 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 UNC93B1Q9H1C4 597 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 OSBPL3Q9H4L5 887 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 BTBD7Q9P203 1132 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 NYAP2Q9P242 653 aa24.56■■□□□ 1.52
HSPG2-205ENST00000427897 HTTP42858 3142 aa24.55■■□□□ 1.52
HSPG2-205ENST00000427897 HMGCRP04035 888 aa24.55■■□□□ 1.52
HSPG2-205ENST00000427897 DSG3P32926 999 aa24.55■■□□□ 1.52
HSPG2-205ENST00000427897 NMIQ13287 307 aaPredicted RBP24.55■■□□□ 1.52
HSPG2-205ENST00000427897 TRMT44Q8IYL2 757 aaKnown RBP24.55■■□□□ 1.52
HSPG2-205ENST00000427897 MB21D1Q8N884 522 aa24.55■■□□□ 1.52
HSPG2-205ENST00000427897 DIAPH3Q9NSV4 1193 aa24.55■■□□□ 1.52
HSPG2-205ENST00000427897 DOCK3Q8IZD9 2030 aa24.54■■□□□ 1.52
HSPG2-205ENST00000427897 CNMDO75829 334 aa24.54■■□□□ 1.52
HSPG2-205ENST00000427897 TFRCP02786 760 aaKnown RBP24.54■■□□□ 1.52
HSPG2-205ENST00000427897 SDSP20132 328 aa24.54■■□□□ 1.52
HSPG2-205ENST00000427897 TFAP4Q01664 338 aa24.54■■□□□ 1.52
HSPG2-205ENST00000427897 TOMM22Q9NS69 142 aa24.54■■□□□ 1.52
HSPG2-205ENST00000427897 A0A0D9SFI3 127 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 TSPY2A6NKD2 308 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 HIP1O00291 1037 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 GJA8P48165 433 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 CTDSPL2Q05D32 466 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 FAM47AQ5JRC9 791 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 FAM83BQ5T0W9 1011 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 VPS53Q5VIR6 699 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.53■■□□□ 1.52
HSPG2-205ENST00000427897 HMX1Q9NP08 348 aaPredicted RBP24.53■■□□□ 1.52
HSPG2-205ENST00000427897 ISY1Q9ULR0 285 aaKnown RBP24.53■■□□□ 1.52
HSPG2-205ENST00000427897 CTDP1Q9Y5B0 961 aaPredicted RBP24.53■■□□□ 1.52
HSPG2-205ENST00000427897 CENPFP49454 3210 aa24.53■■□□□ 1.52
HSPG2-205ENST00000427897 F5H6K3 240 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 TTLL1O95922 423 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 XRCC5P13010 732 aaKnown RBP24.52■■□□□ 1.52
HSPG2-205ENST00000427897 ZKSCAN1P17029 563 aaPredicted RBP24.52■■□□□ 1.52
HSPG2-205ENST00000427897 KLRC3Q07444 240 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 PPP4R3BQ5MIZ7 849 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 POTEEQ6S8J3 1075 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 U2AF1L4Q8WU68 220 aaKnown RBP24.52■■□□□ 1.52
HSPG2-205ENST00000427897 ATG4CQ96DT6 458 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 CEP95Q96GE4 821 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 DEFB118Q96PH6 123 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 SPATC1LQ9H0A9 340 aa24.52■■□□□ 1.52
HSPG2-205ENST00000427897 SLC15A5A6NIM6 579 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 SGPL1O95470 568 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 PTPREP23469 700 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 MAP2K5Q13163 448 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 NCAPG2Q86XI2 1143 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 NEDD1Q8NHV4 660 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 MTMR4Q9NYA4 1195 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 CCDC171Q6TFL3 1326 aa24.51■■□□□ 1.51
HSPG2-205ENST00000427897 RANBP6O60518 1105 aaKnown RBP24.5■■□□□ 1.51
HSPG2-205ENST00000427897 ALX1Q15699 326 aa24.5■■□□□ 1.51
HSPG2-205ENST00000427897 MORN1Q5T089 497 aa24.5■■□□□ 1.51
HSPG2-205ENST00000427897 CWC27Q6UX04 472 aaKnown RBP24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms