RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 KANSL2Q9H9L4 492 aa23.15■■□□□ 1.3
HLCS-204ENST00000427746 MINDY4BA8MYZ0 360 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 IGHDP01880 384 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 RASA1P20936 1047 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 IFNL3Q8IZI9 196 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 SOCS4Q8WXH5 440 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 USP6NLQ92738 828 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 EVI5LQ96CN4 794 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 SH2D4AQ9H788 454 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 VCPKMTQ9H867 229 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 BTBD7Q9P203 1132 aa23.14■■□□□ 1.29
HLCS-204ENST00000427746 GREB1LQ9C091 1923 aaPredicted RBP23.14■■□□□ 1.29
HLCS-204ENST00000427746 EEF2P13639 858 aaKnown RBP23.13■■□□□ 1.29
HLCS-204ENST00000427746 TDO2P48775 406 aa23.13■■□□□ 1.29
HLCS-204ENST00000427746 COG2Q14746 738 aa23.13■■□□□ 1.29
HLCS-204ENST00000427746 GPR142Q7Z601 462 aa23.13■■□□□ 1.29
HLCS-204ENST00000427746 NUDT12Q9BQG2 462 aa23.13■■□□□ 1.29
HLCS-204ENST00000427746 LNPKQ9C0E8 428 aa23.13■■□□□ 1.29
HLCS-204ENST00000427746 RLFQ13129 1914 aa23.13■■□□□ 1.29
HLCS-204ENST00000427746 HMGCRP04035 888 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 APPP05067 770 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 XRCC5P13010 732 aaKnown RBP23.12■■□□□ 1.29
HLCS-204ENST00000427746 CCNA1P78396 465 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 MORN1Q5T089 497 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 PLEKHH3Q7Z736 793 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 U2AF1L4Q8WU68 220 aaKnown RBP23.12■■□□□ 1.29
HLCS-204ENST00000427746 TANGO6Q9C0B7 1094 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 PAK6Q9NQU5 681 aaPredicted RBP23.12■■□□□ 1.29
HLCS-204ENST00000427746 HOXC10Q9NYD6 342 aa23.12■■□□□ 1.29
HLCS-204ENST00000427746 A0A0G2JMZ2 1700 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 FOXP2O15409 715 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 UBE2Q1Q7Z7E8 422 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 CCAR1Q8IX12 1150 aaKnown RBP23.11■■□□□ 1.29
HLCS-204ENST00000427746 SPICE1Q8N0Z3 855 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 STK11IPQ8N1F8 1099 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 TRIB2Q92519 343 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 NACAP1Q9BZK3 213 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 MKNK2Q9HBH9 465 aa23.11■■□□□ 1.29
HLCS-204ENST00000427746 SUPT16HQ9Y5B9 1047 aaKnown RBP23.11■■□□□ 1.29
HLCS-204ENST00000427746 WDR46O15213 610 aaKnown RBP23.1■■□□□ 1.29
HLCS-204ENST00000427746 SGPL1O95470 568 aa23.1■■□□□ 1.29
HLCS-204ENST00000427746 CYP2B6P20813 491 aa23.1■■□□□ 1.29
HLCS-204ENST00000427746 DSG3P32926 999 aa23.09■■□□□ 1.29
HLCS-204ENST00000427746 NUCB1Q02818 461 aa23.09■■□□□ 1.29
HLCS-204ENST00000427746 TRIM32Q13049 653 aa23.09■■□□□ 1.29
HLCS-204ENST00000427746 B4GALNT3Q6L9W6 998 aa23.09■■□□□ 1.29
HLCS-204ENST00000427746 CHD1LQ86WJ1 897 aa23.09■■□□□ 1.29
HLCS-204ENST00000427746 TICAM2Q86XR7 235 aa23.09■■□□□ 1.29
HLCS-204ENST00000427746 IGKV6D-41A0A0C4DH26 115 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 RGS2P41220 211 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 ATP2B2Q01814 1243 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 MAP3K21Q5TCX8 1036 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 CCDC129Q6ZRS4 1044 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 DEFB118Q96PH6 123 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.08■■□□□ 1.29
HLCS-204ENST00000427746 NAPBQ9H115 298 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 ZNF287Q9HBT7 754 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 NYAP2Q9P242 653 aa23.08■■□□□ 1.29
HLCS-204ENST00000427746 FLOT1O75955 427 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 CAPN2P17655 700 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 TRMT44Q8IYL2 757 aaKnown RBP23.07■■□□□ 1.28
HLCS-204ENST00000427746 MB21D1Q8N884 522 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 APBA2Q99767 749 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 CRISPLD2Q9H0B8 497 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 GOPCQ9HD26 462 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 HELLSQ9NRZ9 838 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 PARP14Q460N5 1801 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 RPTORQ8N122 1335 aa23.07■■□□□ 1.28
HLCS-204ENST00000427746 SLC15A5A6NIM6 579 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 PRDM1O75626 825 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 PTPREP23469 700 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 PPARAQ07869 468 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 MAP2K5Q13163 448 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 PLEKHM2Q8IWE5 1019 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 MOV10L1Q9BXT6 1211 aaKnown RBP23.06■■□□□ 1.28
HLCS-204ENST00000427746 SPATC1LQ9H0A9 340 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 OSBPL3Q9H4L5 887 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 ADAMTS5Q9UNA0 930 aa23.06■■□□□ 1.28
HLCS-204ENST00000427746 GRB14Q14449 540 aa23.05■■□□□ 1.28
HLCS-204ENST00000427746 CCL14Q16627 93 aa23.05■■□□□ 1.28
HLCS-204ENST00000427746 VPS53Q5VIR6 699 aa23.05■■□□□ 1.28
HLCS-204ENST00000427746 ZNF444Q8N0Y2 327 aaPredicted RBP23.05■■□□□ 1.28
HLCS-204ENST00000427746 ATG4CQ96DT6 458 aa23.05■■□□□ 1.28
HLCS-204ENST00000427746 CWC22Q9HCG8 908 aaKnown RBP23.05■■□□□ 1.28
HLCS-204ENST00000427746 HMX1Q9NP08 348 aaPredicted RBP23.05■■□□□ 1.28
HLCS-204ENST00000427746 PLIN4Q96Q06 1357 aa23.04■■□□□ 1.28
HLCS-204ENST00000427746 ZKSCAN1P17029 563 aaPredicted RBP23.04■■□□□ 1.28
HLCS-204ENST00000427746 PDE4BQ07343 736 aa23.04■■□□□ 1.28
HLCS-204ENST00000427746 WDR78Q5VTH9 848 aa23.04■■□□□ 1.28
HLCS-204ENST00000427746 SHCBP1Q8NEM2 672 aa23.04■■□□□ 1.28
HLCS-204ENST00000427746 FAM227BQ96M60 508 aa23.04■■□□□ 1.28
HLCS-204ENST00000427746 FBXO28Q9NVF7 368 aa23.04■■□□□ 1.28
HLCS-204ENST00000427746 A0A0D9SFI3 127 aa23.03■■□□□ 1.28
HLCS-204ENST00000427746 FARP2O94887 1054 aaPredicted RBP23.03■■□□□ 1.28
HLCS-204ENST00000427746 TFRCP02786 760 aaKnown RBP23.03■■□□□ 1.28
HLCS-204ENST00000427746 HOXC6P09630 235 aa23.03■■□□□ 1.28
HLCS-204ENST00000427746 PRKAR2AP13861 404 aaKnown RBP23.03■■□□□ 1.28
HLCS-204ENST00000427746 NEDD1Q8NHV4 660 aa23.03■■□□□ 1.28
HLCS-204ENST00000427746 MKL1Q969V6 931 aa23.03■■□□□ 1.28
HLCS-204ENST00000427746 CEP95Q96GE4 821 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms