RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 RBPJLQ9UBG7 517 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 TMX2Q9Y320 296 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 CCDC171Q6TFL3 1326 aa17.72■□□□□ 0.43
RTN4-210ENST00000427710 TNPO2O14787 897 aaKnown RBP17.71■□□□□ 0.43
RTN4-210ENST00000427710 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.43
RTN4-210ENST00000427710 HOXD10P28358 340 aa17.71■□□□□ 0.43
RTN4-210ENST00000427710 RAET1EQ8TD07 263 aa17.71■□□□□ 0.43
RTN4-210ENST00000427710 TANGO6Q9C0B7 1094 aa17.71■□□□□ 0.43
RTN4-210ENST00000427710 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
RTN4-210ENST00000427710 MORF4L1Q9UBU8 362 aa17.71■□□□□ 0.43
RTN4-210ENST00000427710 CNMDO75829 334 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 GNRH1P01148 92 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 FGAP02671 866 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 HAND2P61296 217 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 ERVK-9P63128 1117 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 ERVK-24P63145 666 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 ARMC5Q96C12 935 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 VCPKMTQ9H867 229 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 KANSL2Q9H9L4 492 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
RTN4-210ENST00000427710 PDE4DIPQ5VU43 2346 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 SPDYE16A6NNV3 312 aaPredicted RBP17.69■□□□□ 0.42
RTN4-210ENST00000427710 FLT3LGP49771 235 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 PRMT2P55345 433 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 PDE4BQ07343 736 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 ALX1Q15699 326 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 GPRC5AQ8NFJ5 357 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 ZNF333Q96JL9 665 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 PORCNQ9H237 461 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 IL25Q9H293 177 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 BTBD7Q9P203 1132 aa17.69■□□□□ 0.42
RTN4-210ENST00000427710 RBBP6Q7Z6E9 1792 aaKnown RBP17.68■□□□□ 0.42
RTN4-210ENST00000427710 IGKV6D-41A0A0C4DH26 115 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 SLC3A2P08195 630 aaKnown RBP17.68■□□□□ 0.42
RTN4-210ENST00000427710 ELNP15502 786 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 TFAP4Q01664 338 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 COA7Q96BR5 231 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 CEP95Q96GE4 821 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 NUP88Q99567 741 aaPredicted RBP17.68■□□□□ 0.42
RTN4-210ENST00000427710 SH2D4AQ9H788 454 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 CLIP2Q9UDT6 1046 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.68■□□□□ 0.425e-6■□□□□ 9.7
RTN4-210ENST00000427710 BRCA2P51587 3418 aa17.68■□□□□ 0.42
RTN4-210ENST00000427710 A0A0G2JMZ2 1700 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 TSPY3P0CV98 308 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 TSPY8P0CW00 308 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 TICAM2Q86XR7 235 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 LRRC47Q8N1G4 583 aaKnown RBP17.67■□□□□ 0.42
RTN4-210ENST00000427710 NEDD1Q8NHV4 660 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 ZNF287Q9HBT7 754 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 FBXO28Q9NVF7 368 aa17.67■□□□□ 0.42
RTN4-210ENST00000427710 ADCY3O60266 1144 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 NMT2O60551 498 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 FLOT1O75955 427 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 GRK4P32298 578 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 RGS19P49795 217 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 COG2Q14746 738 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 MTFR1Q15390 333 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 RRP12Q5JTH9 1297 aaKnown RBP17.66■□□□□ 0.42
RTN4-210ENST00000427710 FAM83BQ5T0W9 1011 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 NBPF11Q86T75 865 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 GTF3C2Q8WUA4 911 aaPredicted RBP17.66■□□□□ 0.42
RTN4-210ENST00000427710 ATG4CQ96DT6 458 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 GOPCQ9HD26 462 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 MTMR4Q9NYA4 1195 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 NYAP2Q9P242 653 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 BIN2Q9UBW5 565 aaPredicted RBP17.66■□□□□ 0.42
RTN4-210ENST00000427710 ANAPC4Q9UJX5 808 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 GJD2Q9UKL4 321 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 RABGAP1Q9Y3P9 1069 aa17.66■□□□□ 0.42
RTN4-210ENST00000427710 HIP1O00291 1037 aa17.65■□□□□ 0.42
RTN4-210ENST00000427710 WDR46O15213 610 aaKnown RBP17.65■□□□□ 0.42
RTN4-210ENST00000427710 RANBP6O60518 1105 aaKnown RBP17.65■□□□□ 0.42
RTN4-210ENST00000427710 DSG3P32926 999 aa17.65■□□□□ 0.42
RTN4-210ENST00000427710 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
RTN4-210ENST00000427710 LPAR1Q92633 364 aa17.65■□□□□ 0.42
RTN4-210ENST00000427710 NBPF3Q9H094 633 aa17.65■□□□□ 0.42
RTN4-210ENST00000427710 SMCHD1A6NHR9 2005 aa17.65■□□□□ 0.42
RTN4-210ENST00000427710 TSPY2A6NKD2 308 aa17.64■□□□□ 0.41
RTN4-210ENST00000427710 NDUFB10O96000 172 aa17.64■□□□□ 0.41
RTN4-210ENST00000427710 EN2P19622 333 aaPredicted RBP17.64■□□□□ 0.41
RTN4-210ENST00000427710 CYP2B6P20813 491 aa17.64■□□□□ 0.41
RTN4-210ENST00000427710 MFAP1P55081 439 aaKnown RBP17.64■□□□□ 0.41
RTN4-210ENST00000427710 TBC1D10CQ8IV04 446 aa17.64■□□□□ 0.41
RTN4-210ENST00000427710 CCAR1Q8IX12 1150 aaKnown RBP17.64■□□□□ 0.41
RTN4-210ENST00000427710 CWC22Q9HCG8 908 aaKnown RBP17.64■□□□□ 0.41
RTN4-210ENST00000427710 PLIN4Q96Q06 1357 aa17.64■□□□□ 0.41
RTN4-210ENST00000427710 F5H6K3 240 aa17.63■□□□□ 0.41
RTN4-210ENST00000427710 TTLL1O95922 423 aa17.63■□□□□ 0.41
RTN4-210ENST00000427710 MLLT1Q03111 559 aaPredicted RBP17.63■□□□□ 0.41
RTN4-210ENST00000427710 KLRC3Q07444 240 aa17.63■□□□□ 0.41
RTN4-210ENST00000427710 PLS1Q14651 629 aa17.63■□□□□ 0.41
RTN4-210ENST00000427710 LBX2Q6XYB7 198 aa17.63■□□□□ 0.41
RTN4-210ENST00000427710 GPR142Q7Z601 462 aa17.63■□□□□ 0.41
RTN4-210ENST00000427710 IL17RBQ9NRM6 502 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms