RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 FOXD4L6Q3SYB3 417 aaPredicted RBP20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 FOXD4L3Q6VB84 417 aaPredicted RBP20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 TMEM87AQ8NBN3 555 aa20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 NEDD1Q8NHV4 660 aa20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 NUP133Q8WUM0 1156 aa20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 CCDC102AQ96A19 550 aa20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 PRMT6Q96LA8 375 aaPredicted RBP20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 EHD4Q9H223 541 aa20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 ZSCAN16Q9H4T2 348 aaPredicted RBP20.87■□□□□ 0.93
AC055811.2-201ENST00000427497 PLIN4Q96Q06 1357 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 PRPF40AO75400 957 aaKnown RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 FMNL1O95466 1100 aaPredicted RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 ZNF157P51786 506 aaPredicted RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 FKBP1BP68106 108 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 PRAMEF18Q5VWM3 479 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 NBPF11Q86T75 865 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 ZFPM1Q8IX07 1006 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 PHKBQ93100 1093 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 DHX36Q9H2U1 1008 aaKnown RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 SWAP70Q9UH65 585 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 SERPINB13Q9UIV8 391 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 COL2A1P02458 1487 aaPredicted RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 SPDYE2BA6NHP3 402 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 SPDYE6P0CI01 402 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 CACNB3P54284 484 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 DNM1Q05193 864 aaKnown RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 FBXO18Q8NFZ0 1043 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 C8orf76Q96K31 380 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 TDRD3Q9H7E2 651 aaKnown RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 RBM28Q9NW13 759 aaKnown RBP20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 TAOK2Q9UL54 1235 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 CNPY2Q9Y2B0 182 aa20.86■□□□□ 0.93
AC055811.2-201ENST00000427497 CA12O43570 354 aa20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 HLA-DOAP06340 250 aa20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 NOVP48745 357 aa20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 SSRP1Q08945 709 aaKnown RBP20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 DLGAP5Q15398 846 aa20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 APOBEC3FQ8IUX4 373 aaKnown RBP20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 CRACR2BQ8N4Y2 399 aaPredicted RBP20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 MTMR14Q8NCE2 650 aa20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 MYH15Q9Y2K3 1946 aa20.85■□□□□ 0.93
AC055811.2-201ENST00000427497 ENTPD3O75355 529 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 CAPN15O75808 1086 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 FOSBP53539 338 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 FUT2Q10981 343 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 MAP3K14Q99558 947 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 ALG1Q9BT22 464 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 TSKSQ9UJT2 592 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 ATRNL1Q5VV63 1379 aa20.84■□□□□ 0.93
AC055811.2-201ENST00000427497 SLC10A3P09131 477 aa20.83■□□□□ 0.93
AC055811.2-201ENST00000427497 KLHL40Q2TBA0 621 aa20.83■□□□□ 0.93
AC055811.2-201ENST00000427497 SH3BP5LQ7L8J4 393 aa20.83■□□□□ 0.93
AC055811.2-201ENST00000427497 SLC26A6Q9BXS9 759 aa20.83■□□□□ 0.93
AC055811.2-201ENST00000427497 KAT14Q9H8E8 782 aa20.83■□□□□ 0.93
AC055811.2-201ENST00000427497 GREB1LQ9C091 1923 aaPredicted RBP20.83■□□□□ 0.93
AC055811.2-201ENST00000427497 DDTLA6NHG4 134 aaPredicted RBP20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 SHMT1P34896 483 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 GUCY1B3Q02153 619 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 TCP10Q12799 353 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 MOB2Q70IA6 237 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 TRIM22Q8IYM9 498 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 PNMA1Q8ND90 353 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 AIFM3Q96NN9 605 aa20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.83■□□□□ 0.92
AC055811.2-201ENST00000427497 FAM173BQ6P4H8 233 aa20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 TMTC3Q6ZXV5 915 aa20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 WASF1Q92558 559 aa20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 RNF26Q9BY78 433 aaPredicted RBP20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 GDPD2Q9HCC8 539 aa20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 PI4KBQ9UBF8 816 aa20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 MYH6P13533 1939 aa20.82■□□□□ 0.92
AC055811.2-201ENST00000427497 IGKV6D-41A0A0C4DH26 115 aa20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 NF2P35240 595 aa20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 KRT85P78386 507 aa20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 KIF23Q02241 960 aaPredicted RBP20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 OTUD7BQ6GQQ9 843 aa20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 METTL16Q86W50 562 aaKnown RBP20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 CTCFLQ8NI51 663 aaPredicted RBP20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 TMEM47Q9BQJ4 181 aa20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 DNAJC18Q9H819 358 aa20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 DDX49Q9Y6V7 483 aaKnown RBP20.81■□□□□ 0.92
AC055811.2-201ENST00000427497 PLEKHA8P1O95397 391 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 DEXIO95424 95 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 SPDYE2Q495Y8 402 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 RASAL3Q86YV0 1011 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 CMTR1Q8N1G2 835 aaKnown RBP20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 CEP95Q96GE4 821 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 GJB4Q9NTQ9 266 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 ZNF70Q9UC06 446 aaPredicted RBP20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 CASP8AP2Q9UKL3 1982 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 UBE2Q2LH0YL09 131 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 AKR1B1P15121 316 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 NCLP19338 710 aaKnown RBP20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 GUCY1A2P33402 732 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 TTLL12Q14166 644 aaPredicted RBP20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 CSPP1Q1MSJ5 1256 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 FOXP4Q8IVH2 680 aaPredicted RBP20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 TMOD2Q9NZR1 351 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
AC055811.2-201ENST00000427497 PRPF3O43395 683 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms