RNA–Protein interactions for RNA: ENST00000427449.1

HLA-DQB2-230, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

Gene HLA-DQB2, Length 721 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-230ENST00000427449 GJB1P08034 283 aa19.18■□□□□ 0.66
HLA-DQB2-230ENST00000427449 USP14P54578 494 aa19.18■□□□□ 0.66
HLA-DQB2-230ENST00000427449 CABP5Q9NP86 173 aa19.18■□□□□ 0.66
HLA-DQB2-230ENST00000427449 MNX1P50219 401 aaPredicted RBP19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 ICA1Q05084 483 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GPR142Q7Z601 462 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GPRC5AQ8NFJ5 357 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 CCDC17Q96LX7 622 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 CRISPLD2Q9H0B8 497 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 RABGAP1Q9Y3P9 1069 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 LRRC37A2A6NM11 1700 aa19.17■□□□□ 0.66
HLA-DQB2-230ENST00000427449 AAMPQ13685 434 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 ANKRD45Q5TZF3 282 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 CCDC129Q6ZRS4 1044 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 GTF3C2Q8WUA4 911 aaPredicted RBP19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 COA7Q96BR5 231 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 PAGR1Q9BTK6 254 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 TMEM106CQ9BVX2 250 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 SMCHD1A6NHR9 2005 aa19.16■□□□□ 0.66
HLA-DQB2-230ENST00000427449 CEP290O15078 2479 aa19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 MPHOSPH10O00566 681 aaKnown RBP19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 ERC2O15083 957 aa19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 EEF2P13639 858 aaKnown RBP19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 IFNL3Q8IZI9 196 aa19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 U2AF1L4Q8WU68 220 aaKnown RBP19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 ADAMTS5Q9UNA0 930 aa19.15■□□□□ 0.66
HLA-DQB2-230ENST00000427449 HMGCRP04035 888 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 XRCC5P13010 732 aaKnown RBP19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 MAPK4P31152 587 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 CCL14Q16627 93 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 VPS53Q5VIR6 699 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 REPS2Q8NFH8 660 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 FSD1Q9BTV5 496 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 RNF208Q9H0X6 261 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 FLRT1Q9NZU1 646 aa19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.14■□□□□ 0.65
HLA-DQB2-230ENST00000427449 MCM3APO60318 1980 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 A0A0D9SFI3 127 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 PATL2C9JE40 543 aaKnown RBP19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 GRB14Q14449 540 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 SPICE1Q8N0Z3 855 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 SOCS4Q8WXH5 440 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 LPAR1Q92633 364 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 LNPKQ9C0E8 428 aa19.13■□□□□ 0.65
HLA-DQB2-230ENST00000427449 SGPL1O95470 568 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 GNAT2P19087 354 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 DSG3P32926 999 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NUCB1Q02818 461 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 PLEKHM2Q8IWE5 1019 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NKX2-3Q8TAU0 364 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 ATG4CQ96DT6 458 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 FAM227BQ96M60 508 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 MOV10L1Q9BXT6 1211 aaKnown RBP19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 OSBPL3Q9H4L5 887 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 FBXO28Q9NVF7 368 aa19.12■□□□□ 0.65
HLA-DQB2-230ENST00000427449 WDR46O15213 610 aaKnown RBP19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 HOXC6P09630 235 aa19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 UBXN2AP68543 259 aa19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 PLEKHH3Q7Z736 793 aa19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 ZNF589Q86UQ0 364 aaPredicted RBP19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NBPF3Q9H094 633 aa19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 KANSL2Q9H9L4 492 aa19.11■□□□□ 0.65
HLA-DQB2-230ENST00000427449 PRDM1O75626 825 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 CYP2B6P20813 491 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 PTPREP23469 700 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 COG2Q14746 738 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NPLOC4Q8TAT6 608 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 EVI5LQ96CN4 794 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 APBA2Q99767 749 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NUDT12Q9BQG2 462 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 ARHGEF10LQ9HCE6 1279 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NYAP2Q9P242 653 aa19.1■□□□□ 0.65
HLA-DQB2-230ENST00000427449 LTBP2Q14767 1821 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 MINDY4BA8MYZ0 360 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 NOVP48745 357 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 MAP2K5Q13163 448 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 CHD1LQ86WJ1 897 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 STK11IPQ8N1F8 1099 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 DIS3LQ8TF46 1054 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 CEP95Q96GE4 821 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 DEFB118Q96PH6 123 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 SPATC1LQ9H0A9 340 aa19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 ZNF214Q9UL59 606 aaPredicted RBP19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
HLA-DQB2-230ENST00000427449 ZMYM6O95789 1325 aa19.08■□□□□ 0.65
HLA-DQB2-230ENST00000427449 RPTORQ8N122 1335 aa19.08■□□□□ 0.65
HLA-DQB2-230ENST00000427449 FGRP09769 529 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 PDE4AP27815 886 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 TDO2P48775 406 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 PPARAQ07869 468 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 CACNB2Q08289 660 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 TMEM132BQ14DG7 1078 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 SHCBP1Q8NEM2 672 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 MKL1Q969V6 931 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 NUP88Q99567 741 aaPredicted RBP19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 TANGO6Q9C0B7 1094 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 INCENPQ9NQS7 918 aa19.08■□□□□ 0.64
HLA-DQB2-230ENST00000427449 ANAPC4Q9UJX5 808 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms