RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 HOOK2Q96ED9 719 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 CSRNP1Q96S65 589 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 IL25Q9H293 177 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 EPB41L4AQ9HCS5 686 aaPredicted RBP8.88□□□□□ -0.99
LINC01049-201ENST00000426840 PRDM9Q9NQV7 894 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 MCM9Q9NXL9 1143 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 PI4KBQ9UBF8 816 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 FOCADQ5VW36 1801 aa8.88□□□□□ -0.99
LINC01049-201ENST00000426840 UNCXA6NJT0 531 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 RASSF10A6NK89 507 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 FAM196BA6NMK8 535 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 USP17L12C9JPN9 530 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 USP17L21D6R901 530 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 CYP2D6P10635 497 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 HUNKP57058 714 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 RRP1BQ14684 758 aaKnown RBP8.87□□□□□ -0.99
LINC01049-201ENST00000426840 ALX1Q15699 326 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 DEFB115Q30KQ5 88 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 Q3C1V9 767 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 SBK1Q52WX2 424 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 C12orf60Q5U649 245 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 DCAF15Q66K64 600 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 CTR9Q6PD62 1173 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.87□□□□□ -0.99
LINC01049-201ENST00000426840 TTC6Q86TZ1 520 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 DNAJC5GQ8N7S2 189 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC01049-201ENST00000426840 HHIPL1Q96JK4 782 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 ZNF341Q9BYN7 854 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 KDM4CQ9H3R0 1056 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 DNAJC18Q9H819 358 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 DIAPH3Q9NSV4 1193 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 ABT1Q9ULW3 272 aaKnown RBP8.87□□□□□ -0.99
LINC01049-201ENST00000426840 GTF3C3Q9Y5Q9 886 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 MYH1P12882 1939 aa8.87□□□□□ -0.99
LINC01049-201ENST00000426840 CYP2D7A0A087X1C5 515 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 FDX1P10109 184 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 HSPD1P10809 573 aaKnown RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 INPP5BP32019 993 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 IREB2P48200 963 aaKnown RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 GABPAQ06546 454 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 SLC4A8Q2Y0W8 1093 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 RGMBQ6NW40 437 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 ANKRD13AQ8IZ07 590 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 FAM160A2Q8N612 972 aaPredicted RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 ZKSCAN4Q969J2 545 aaPredicted RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 CLMNQ96JQ2 1002 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 EHD4Q9H223 541 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 HERC5Q9UII4 1024 aaKnown RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 SIPA1L1O43166 1804 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 PAPPA2Q9BXP8 1791 aa8.86□□□□□ -0.99
LINC01049-201ENST00000426840 BAZ2AQ9UIF9 1905 aaKnown RBP8.86□□□□□ -0.99
LINC01049-201ENST00000426840 CCDC171Q6TFL3 1326 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 FAM155AB1AL88 458 aaPredicted RBP8.85□□□□□ -0.99
LINC01049-201ENST00000426840 SGSM2O43147 1006 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 FGAP02671 866 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 APPP05067 770 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 HLA-DOAP06340 250 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 JAG1P78504 1218 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 NOL9Q5SY16 702 aaKnown RBP8.85□□□□□ -0.99
LINC01049-201ENST00000426840 CYP4F22Q6NT55 531 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 TATDN1Q6P1N9 297 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 RUFY2Q8WXA3 655 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 SLC10A4Q96EP9 437 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 WRNIP1Q96S55 665 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 SERPINB13Q9UIV8 391 aa8.85□□□□□ -0.99
LINC01049-201ENST00000426840 MINDY4BA8MYZ0 360 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 CTNND1O60716 968 aaKnown RBP8.84□□□□□ -0.99
LINC01049-201ENST00000426840 SHMT1P34896 483 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 CAP2P40123 477 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 TDO2P48775 406 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 VEGFBP49765 207 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 ZNF157P51786 506 aaPredicted RBP8.84□□□□□ -0.99
LINC01049-201ENST00000426840 MFAP1P55081 439 aaKnown RBP8.84□□□□□ -0.99
LINC01049-201ENST00000426840 PTH1RQ03431 593 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 VGLL4Q14135 290 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 CSPP1Q1MSJ5 1256 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 DYNLL2Q96FJ2 89 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 DDRGK1Q96HY6 314 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 CAPNS2Q96L46 248 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 ESYT1Q9BSJ8 1104 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 DSCC1Q9BVC3 393 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 NACAP1Q9BZK3 213 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 PRKD2Q9BZL6 878 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 ARPP21Q9UBL0 812 aaPredicted RBP8.84□□□□□ -0.99
LINC01049-201ENST00000426840 TACC3Q9Y6A5 838 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 SNCAIPQ9Y6H5 919 aa8.84□□□□□ -0.99
LINC01049-201ENST00000426840 RAD50Q92878 1312 aa8.83□□□□□ -1
LINC01049-201ENST00000426840 DDX60LQ5H9U9 1706 aaKnown RBP8.83□□□□□ -1
LINC01049-201ENST00000426840 CDC45O75419 566 aa8.83□□□□□ -1
LINC01049-201ENST00000426840 GJA5P36382 358 aa8.83□□□□□ -1
LINC01049-201ENST00000426840 CDK8P49336 464 aa8.83□□□□□ -1
LINC01049-201ENST00000426840 SHROOM1Q2M3G4 852 aaPredicted RBP8.83□□□□□ -1
LINC01049-201ENST00000426840 SPRYD7Q5W111 196 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms