RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 VSIG1Q86XK7 387 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 VPS37BQ9H9H4 285 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 TRIM35Q9UPQ4 493 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 SF3A3Q12874 501 aaKnown RBP eCLIP19.85■□□□□ 0.774e-7■■■■□ 22.2
ARHGEF28-203ENST00000426542 LONRF2Q1L5Z9 754 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 MIER3Q7Z3K6 550 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 NIM1KQ8IY84 436 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 PCDHB13Q9Y5F0 798 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 GAS7O60861 476 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 MAN1A1P33908 653 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 OTUD6AQ7L8S5 288 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 CROCCP2Q86T23 111 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 ORAI2Q96SN7 254 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 RIOK1Q9BRS2 568 aaKnown RBP19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 IFIH1Q9BYX4 1025 aaKnown RBP19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 RASSF4Q9H2L5 321 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 PLCB1Q9NQ66 1216 aa19.85■□□□□ 0.77
ARHGEF28-203ENST00000426542 SRGAP1Q7Z6B7 1085 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 CMTR1Q8N1G2 835 aaKnown RBP19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 NT5C3AQ9H0P0 336 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 CYP2J2P51589 502 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 NLRX1Q86UT6 975 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 U2AF1L4Q8WU68 220 aaKnown RBP19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 VCX3BQ9H321 246 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 FRMPD2Q68DX3 1309 aaPredicted RBP19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 KDM3AQ9Y4C1 1321 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 SPOUT1Q5T280 376 aaKnown RBP19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 BIVM-ERCC5R4GMW8 1640 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 GNA14O95837 355 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 P4HA1P13674 534 aa19.84■□□□□ 0.77
ARHGEF28-203ENST00000426542 BSPRYQ5W0U4 402 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 CCDC84Q86UT8 332 aaPredicted RBP19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 GPBP1Q86WP2 473 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 C2CD5Q86YS7 1000 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 SORBS3O60504 671 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 MTMR3Q13615 1198 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 DEPTORQ8TB45 409 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 TBC1D22AQ8WUA7 517 aa19.83■□□□□ 0.77
ARHGEF28-203ENST00000426542 BUB1BO60566 1050 aaPredicted RBP19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 INPP5BP32019 993 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 PDE6BP35913 854 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 ADKP55263 362 aaKnown RBP19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 SND1Q7KZF4 910 aaKnown RBP eCLIP19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 MAIP1Q8WWC4 291 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 GLG1Q92896 1179 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 NUCKS1Q9H1E3 243 aaKnown RBP19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 GTF2IP78347 998 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 DENND2CQ68D51 928 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 ZNF654Q8IZM8 581 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 METTL13Q8N6R0 699 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 HAUS2Q9NVX0 235 aa19.83■□□□□ 0.76
ARHGEF28-203ENST00000426542 CTSWP56202 376 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 ARHGEF16Q5VV41 709 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 GSDMBQ8TAX9 411 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 NUP153P49790 1475 aaKnown RBP19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 ALDH1B1P30837 517 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 YWHAEP62258 255 aaKnown RBP19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 CUL4BQ13620 913 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 MGARPQ8TDB4 240 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 ANO3Q9BYT9 981 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 ABCC10Q5T3U5 1492 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 TESPA1A2RU30 521 aaPredicted RBP19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 LMNTD2Q8IXW0 634 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 AMFRQ9UKV5 643 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 PPIP5K2O43314 1243 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 TECP42680 631 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 SATB1Q01826 763 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 ME3Q16798 604 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 KMT5BQ4FZB7 885 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 MED10Q9BTT4 135 aa19.82■□□□□ 0.76
ARHGEF28-203ENST00000426542 NEURL1BA8MQ27 555 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 ATP5JP18859 108 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 EDC3Q96F86 508 aaKnown RBP19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 ZSCAN10Q96SZ4 725 aaPredicted RBP19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 ST7Q9NRC1 585 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 RSAD2Q8WXG1 361 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 NUF2Q9BZD4 464 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 ZMYM4Q5VZL5 1548 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 YARSP54577 528 aaKnown RBP19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 SLC12A2P55011 1212 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 ATP8A2Q9NTI2 1148 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 KCNJ18B7U540 433 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 KCNJ12Q14500 433 aa19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 XPO4Q9C0E2 1151 aaKnown RBP19.81■□□□□ 0.76
ARHGEF28-203ENST00000426542 CASQ2O14958 399 aaPredicted RBP19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 PPP1R12CQ9BZL4 782 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 ABCB4P21439 1286 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 SMCR8Q8TEV9 937 aaPredicted RBP19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 A6NNZ2 444 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 EIF4A1P60842 406 aaKnown RBP19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 TUBB8Q3ZCM7 444 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 COL17A1Q9UMD9 1497 aaPredicted RBP19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 ZNF445P59923 1031 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 KRT81Q14533 505 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 PRR16Q569H4 304 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 POTEDQ86YR6 584 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 CHURC1Q8WUH1 139 aa19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 ZNF496Q96IT1 587 aaPredicted RBP19.8■□□□□ 0.76
ARHGEF28-203ENST00000426542 RAB17Q9H0T7 212 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms