RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 SAPCD2Q86UD0 394 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DYNLL2Q96FJ2 89 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DDRGK1Q96HY6 314 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 REPIN1Q9BWE0 567 aaKnown RBP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ZNF341Q9BYN7 854 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DAXXQ9UER7 740 aaPredicted RBP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SERPINB13Q9UIV8 391 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PCDHB3Q9Y5E6 796 aa8.41□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TRPM7Q96QT4 1865 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MINDY4BA8MYZ0 360 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 UBE2Q2LH0YL09 131 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 EPB41L2O43491 1005 aaKnown RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ACTN4O43707 911 aaKnown RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PPP1R12BO60237 982 aaPredicted RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 INPP5BP32019 993 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CDK8P49336 464 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 MDM2Q00987 491 aaPredicted RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CTDSPL2Q05D32 466 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PPARAQ07869 468 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PRKG1Q13976 671 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 NOL9Q5SY16 702 aaKnown RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ARMC9Q7Z3E5 817 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 C2orf69Q8N8R5 385 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SLC44A5Q8NCS7 719 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 USP26Q9BXU7 913 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ZNF408Q9H9D4 720 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ANO2Q9NQ90 1003 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 INCENPQ9NQS7 918 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 SWAP70Q9UH65 585 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 ANGEL1Q9UNK9 670 aaKnown RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 RBM8AQ9Y5S9 174 aaKnown RBP8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TAF6LQ9Y6J9 622 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 TLL2Q9Y6L7 1015 aa8.4□□□□□ -1.06
CHCHD3P1-201ENST00000425516 PAPPA2Q9BXP8 1791 aa8.4□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TULP1O00294 542 aaPredicted RBP8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZNF213O14771 459 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CTNND1O60716 968 aaKnown RBP8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CYP21A2P08686 494 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RASA1P20936 1047 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CAP2P40123 477 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 IREB2P48200 963 aaKnown RBP8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HAND2P61296 217 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SHROOM1Q2M3G4 852 aaPredicted RBP8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TSGA10IPQ3SY00 556 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 KIAA1211Q6ZU35 1233 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TBC1D10CQ8IV04 446 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 AMOTL1Q8IY63 956 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ANKRD13AQ8IZ07 590 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CRACR2BQ8N4Y2 399 aaPredicted RBP8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 STAG1Q8WVM7 1258 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 KCNB2Q92953 911 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZKSCAN4Q969J2 545 aaPredicted RBP8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HHIPL1Q96JK4 782 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CLMNQ96JQ2 1002 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 WRNIP1Q96S55 665 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SNCAIPQ9Y6H5 919 aa8.39□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SLC27A2O14975 620 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ORC4O43929 436 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 ZMYND10O75800 440 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 REC8O95072 547 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HSPA6P17066 643 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GUCY1A2P33402 732 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HUNKP57058 714 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 VGLL4Q14135 290 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 IMMTQ16891 758 aaKnown RBP8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CERKLQ49MI3 558 aaPredicted RBP8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 AKNAD1Q5T1N1 836 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CREB3L3Q68CJ9 461 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PPP1R18Q6NYC8 613 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RDH13Q8NBN7 331 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 CCDC17Q96LX7 622 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GINM1Q9NU53 330 aa8.38□□□□□ -1.07
CHCHD3P1-201ENST00000425516 IGKV6D-41A0A0C4DH26 115 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RASSF10A6NK89 507 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 E7EWF7 191 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PRDM1O75626 825 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GDF11O95390 407 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PCP11498 1178 aaKnown RBP8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 AKR1B1P15121 316 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PTPRAP18433 802 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 HSPA4P34932 840 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 GJA5P36382 358 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 PDE4BQ07343 736 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 COL9A3Q14050 684 aaPredicted RBP8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 TTLL12Q14166 644 aaPredicted RBP8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 RGMBQ6NW40 437 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 STOX1Q6ZVD7 989 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SIAH1Q8IUQ4 282 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SCYL3Q8IZE3 742 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 STK11IPQ8N1F8 1099 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 SLC10A4Q96EP9 437 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 MKNK2Q9HBH9 465 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 LAMB1P07942 1786 aa8.37□□□□□ -1.07
CHCHD3P1-201ENST00000425516 LAMA4Q16363 1823 aa8.36□□□□□ -1.07
CHCHD3P1-201ENST00000425516 NEDD4P46934 1319 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms