RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 RBM10P98175 930 aaKnown RBP17.4■□□□□ 0.38
CALD1-206ENST00000424922 RASA3Q14644 834 aa17.4■□□□□ 0.38
CALD1-206ENST00000424922 CLEC10AQ8IUN9 316 aa17.4■□□□□ 0.38
CALD1-206ENST00000424922 CCDC82Q8N4S0 544 aa17.4■□□□□ 0.38
CALD1-206ENST00000424922 TRPM4Q8TD43 1214 aa17.4■□□□□ 0.38
CALD1-206ENST00000424922 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.4■□□□□ 0.383e-13■■■■■ 29.2
CALD1-206ENST00000424922 MTMR4Q9NYA4 1195 aa17.4■□□□□ 0.38
CALD1-206ENST00000424922 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
CALD1-206ENST00000424922 SOCS7O14512 581 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 CLCN1P35523 988 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 TNFAIP1Q13829 316 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 PPP2R5BQ15173 497 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 FOXD4L6Q3SYB3 417 aaPredicted RBP17.39■□□□□ 0.38
CALD1-206ENST00000424922 CCDC183Q5T5S1 534 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 FOXD4L3Q6VB84 417 aaPredicted RBP17.39■□□□□ 0.38
CALD1-206ENST00000424922 TSPY26PQ9H489 355 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 HERC5Q9UII4 1024 aaKnown RBP17.39■□□□□ 0.38
CALD1-206ENST00000424922 MTMR7Q9Y216 660 aa17.39■□□□□ 0.38
CALD1-206ENST00000424922 IGKV6D-41A0A0C4DH26 115 aa17.39■□□□□ 0.37
CALD1-206ENST00000424922 IFNAR1P17181 557 aa17.39■□□□□ 0.37
CALD1-206ENST00000424922 SHROOM1Q2M3G4 852 aaPredicted RBP17.39■□□□□ 0.37
CALD1-206ENST00000424922 CTCFLQ8NI51 663 aaPredicted RBP17.39■□□□□ 0.37
CALD1-206ENST00000424922 PDLIM2Q96JY6 352 aa17.39■□□□□ 0.37
CALD1-206ENST00000424922 PGAP2Q9UHJ9 254 aa17.39■□□□□ 0.37
CALD1-206ENST00000424922 GRIN3BO60391 1043 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 TOP1P11387 765 aaKnown RBP17.38■□□□□ 0.37
CALD1-206ENST00000424922 NOVP48745 357 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 SSRP1Q08945 709 aaKnown RBP17.38■□□□□ 0.37
CALD1-206ENST00000424922 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 CDC37L1Q7L3B6 337 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 SLC26A6Q9BXS9 759 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 RBM28Q9NW13 759 aaKnown RBP17.38■□□□□ 0.37
CALD1-206ENST00000424922 ESPNB1AK53 854 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 H3BQV1 296 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 GDF11O95390 407 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 DNM1Q05193 864 aaKnown RBP17.38■□□□□ 0.37
CALD1-206ENST00000424922 IFFO2Q5TF58 517 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 MIGA2Q7L4E1 593 aa17.38■□□□□ 0.37
CALD1-206ENST00000424922 ELP1O95163 1332 aa17.37■□□□□ 0.37
CALD1-206ENST00000424922 ATAD5Q96QE3 1844 aa17.37■□□□□ 0.37
CALD1-206ENST00000424922 PLEKHA8P1O95397 391 aa17.37■□□□□ 0.37
CALD1-206ENST00000424922 FMNL1O95466 1100 aaPredicted RBP17.37■□□□□ 0.37
CALD1-206ENST00000424922 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
CALD1-206ENST00000424922 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
CALD1-206ENST00000424922 ANGEL2Q5VTE6 544 aaKnown RBP17.37■□□□□ 0.37
CALD1-206ENST00000424922 NBPF11Q86T75 865 aa17.37■□□□□ 0.37
CALD1-206ENST00000424922 CLIP2Q9UDT6 1046 aa17.37■□□□□ 0.37
CALD1-206ENST00000424922 UBE2Q2LH0YL09 131 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 TTLL1O95922 423 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 HIRAP54198 1017 aaPredicted RBP17.36■□□□□ 0.37
CALD1-206ENST00000424922 KRT85P78386 507 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 RRP1BQ14684 758 aaKnown RBP17.36■□□□□ 0.37
CALD1-206ENST00000424922 DPY19L2Q6NUT2 758 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 DEFB129Q9H1M3 183 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 MYH15Q9Y2K3 1946 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 FIBPO43427 364 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 KIF5BP33176 963 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 ATP2B2Q01814 1243 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 TMTC3Q6ZXV5 915 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 TRIM22Q8IYM9 498 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
CALD1-206ENST00000424922 TEPSINQ96N21 525 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 AIFM3Q96NN9 605 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 STK36Q9NRP7 1315 aa17.36■□□□□ 0.37
CALD1-206ENST00000424922 TBC1D12O60347 775 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 JAG1P78504 1218 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 GUCY1B3Q02153 619 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 GRM4Q14833 912 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 SEPT2Q15019 361 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 TMEM179Q6ZVK1 233 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 RASGRP2Q7LDG7 609 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 C8orf76Q96K31 380 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 MAP3K14Q99558 947 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 GH2P01242 217 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 FUT2Q10981 343 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 STAG2Q8N3U4 1231 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 SRBD1Q8N5C6 995 aaKnown RBP17.35■□□□□ 0.37
CALD1-206ENST00000424922 ALG1Q9BT22 464 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 KANSL2Q9H9L4 492 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 GJB4Q9NTQ9 266 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 GGA3Q9NZ52 723 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 MAD2L2Q9UI95 211 aa17.35■□□□□ 0.37
CALD1-206ENST00000424922 GUCY1A2P33402 732 aa17.34■□□□□ 0.37
CALD1-206ENST00000424922 UVSSAQ2YD98 709 aa17.34■□□□□ 0.37
CALD1-206ENST00000424922 OTUD7BQ6GQQ9 843 aa17.34■□□□□ 0.37
CALD1-206ENST00000424922 APOBEC3FQ8IUX4 373 aaKnown RBP17.34■□□□□ 0.37
CALD1-206ENST00000424922 CABP5Q9NP86 173 aa17.34■□□□□ 0.37
CALD1-206ENST00000424922 ADARB2Q9NS39 739 aaKnown RBP17.34■□□□□ 0.37
CALD1-206ENST00000424922 PPP4R3BQ5MIZ7 849 aa17.33■□□□□ 0.37
CALD1-206ENST00000424922 RNF26Q9BY78 433 aaPredicted RBP17.33■□□□□ 0.37
CALD1-206ENST00000424922 SCAND2PQ9GZW5 306 aaPredicted RBP17.33■□□□□ 0.37
CALD1-206ENST00000424922 A0A0U1RQG5 324 aaPredicted RBP17.33■□□□□ 0.36
CALD1-206ENST00000424922 hCG_1642624A0A1W2PR95 340 aa17.33■□□□□ 0.36
CALD1-206ENST00000424922 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.36
CALD1-206ENST00000424922 EEF2P13639 858 aaKnown RBP17.33■□□□□ 0.36
CALD1-206ENST00000424922 AKAP17AQ02040 695 aaKnown RBP17.33■□□□□ 0.36
CALD1-206ENST00000424922 ICA1Q05084 483 aa17.33■□□□□ 0.36
CALD1-206ENST00000424922 USP17L2Q6R6M4 530 aa17.33■□□□□ 0.36
CALD1-206ENST00000424922 V9GY48 417 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms