RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 MPHOSPH10O00566 681 aaKnown RBP19.59■□□□□ 0.73
PUDP-203ENST00000424830 ADORA2AP29274 412 aa19.59■□□□□ 0.73
PUDP-203ENST00000424830 PLCD1P51178 756 aa19.59■□□□□ 0.73
PUDP-203ENST00000424830 COG2Q14746 738 aa19.59■□□□□ 0.73
PUDP-203ENST00000424830 SEPT2Q15019 361 aa19.59■□□□□ 0.73
PUDP-203ENST00000424830 GJC2Q5T442 439 aaPredicted RBP19.59■□□□□ 0.73
PUDP-203ENST00000424830 FTSJ3Q8IY81 847 aaKnown RBP19.59■□□□□ 0.73
PUDP-203ENST00000424830 MOV10L1Q9BXT6 1211 aaKnown RBP19.58■□□□□ 0.73
PUDP-203ENST00000424830 SPATC1LQ9H0A9 340 aa19.58■□□□□ 0.73
PUDP-203ENST00000424830 ANTXR1Q9H6X2 564 aa19.58■□□□□ 0.73
PUDP-203ENST00000424830 PRDM5Q9NQX1 630 aaPredicted RBP19.58■□□□□ 0.73
PUDP-203ENST00000424830 A0A0G2JMZ2 1700 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 MAGEB6P1A0A0J9YX57 407 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 SEPT4O43236 478 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 IGHA2P01877 340 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
PUDP-203ENST00000424830 GUCY1A2P33402 732 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 SLC39A5Q6ZMH5 540 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 ERC1Q8IUD2 1116 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 SHCBP1Q8NEM2 672 aa19.57■□□□□ 0.72
PUDP-203ENST00000424830 RIOK1Q9BRS2 568 aaKnown RBP19.57■□□□□ 0.72
PUDP-203ENST00000424830 CRNKL1Q9BZJ0 848 aaKnown RBP19.57■□□□□ 0.72
PUDP-203ENST00000424830 ERCC3P19447 782 aa19.56■□□□□ 0.72
PUDP-203ENST00000424830 TTF1Q15361 905 aaPredicted RBP19.56■□□□□ 0.72
PUDP-203ENST00000424830 AACSQ86V21 672 aa19.56■□□□□ 0.72
PUDP-203ENST00000424830 ITPRIPQ8IWB1 547 aa19.56■□□□□ 0.72
PUDP-203ENST00000424830 MB21D1Q8N884 522 aa19.56■□□□□ 0.72
PUDP-203ENST00000424830 MCM9Q9NXL9 1143 aa19.56■□□□□ 0.72
PUDP-203ENST00000424830 GABPAQ06546 454 aa19.55■□□□□ 0.72
PUDP-203ENST00000424830 PLS1Q14651 629 aa19.55■□□□□ 0.72
PUDP-203ENST00000424830 ANO1Q5XXA6 986 aa19.55■□□□□ 0.72
PUDP-203ENST00000424830 MROH8Q9H579 483 aa19.55■□□□□ 0.72
PUDP-203ENST00000424830 MYH8P13535 1937 aa19.55■□□□□ 0.72
PUDP-203ENST00000424830 A0A1W2PRG0 241 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 SNX17Q15036 470 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 SHHQ15465 462 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 TRIM60Q495X7 471 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 TMEM179Q6ZVK1 233 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 ABRAQ8N0Z2 381 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 PRUNE2Q8WUY3 3088 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 CDH23Q9H251 3354 aa19.54■□□□□ 0.72
PUDP-203ENST00000424830 SLC9C2Q5TAH2 1124 aa19.53■□□□□ 0.72
PUDP-203ENST00000424830 NCAPG2Q86XI2 1143 aa19.53■□□□□ 0.72
PUDP-203ENST00000424830 BADQ92934 168 aa19.53■□□□□ 0.72
PUDP-203ENST00000424830 CDX2Q99626 313 aaPredicted RBP19.53■□□□□ 0.72
PUDP-203ENST00000424830 SH2D4AQ9H788 454 aa19.53■□□□□ 0.72
PUDP-203ENST00000424830 ARHGEF10LQ9HCE6 1279 aa19.53■□□□□ 0.72
PUDP-203ENST00000424830 COBLO75128 1261 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 FLOT1O75955 427 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 PDE6AP16499 860 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 DSG3P32926 999 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 C9orf50Q5SZB4 431 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 PDLIM7Q9NR12 457 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 SWAP70Q9UH65 585 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 EXOC6BQ9Y2D4 811 aa19.52■□□□□ 0.72
PUDP-203ENST00000424830 SPTBN5Q9NRC6 3674 aaKnown RBP19.52■□□□□ 0.72
PUDP-203ENST00000424830 FCER1AP12319 257 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 ADCYAP1R1P41586 468 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 LRRC41Q15345 812 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 C1orf53Q5VUE5 145 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 CEP85Q6P2H3 762 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 MAFAQ8NHW3 353 aaPredicted RBP19.51■□□□□ 0.71
PUDP-203ENST00000424830 FERMT2Q96AC1 680 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 MAML3Q96JK9 1138 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 SEMA6BQ9H3T3 888 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 SMAD3P84022 425 aaKnown RBP19.51■□□□□ 0.71
PUDP-203ENST00000424830 ICA1Q05084 483 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 FAM47AQ5JRC9 791 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 PRAMEF19Q5SWL8 479 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 SPICE1Q8N0Z3 855 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 SDR42E1Q8WUS8 393 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 ATG4CQ96DT6 458 aa19.51■□□□□ 0.71
PUDP-203ENST00000424830 DCP1AQ9NPI6 582 aaPredicted RBP19.51■□□□□ 0.71
PUDP-203ENST00000424830 ZNF532Q9HCE3 1301 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 PARP14Q460N5 1801 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 RARBP10826 455 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 EVX2Q03828 476 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 HSP90AB4PQ58FF6 505 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 SAMD1Q6SPF0 538 aaPredicted RBP19.5■□□□□ 0.71
PUDP-203ENST00000424830 SLC44A5Q8NCS7 719 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 XPNPEP3Q9NQH7 507 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 NRBP1Q9UHY1 535 aa19.5■□□□□ 0.71
PUDP-203ENST00000424830 ZNFX1Q9P2E3 1918 aaKnown RBP19.49■□□□□ 0.71
PUDP-203ENST00000424830 TRIM43BA6NCK2 446 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 WDR46O15213 610 aaKnown RBP19.49■□□□□ 0.71
PUDP-203ENST00000424830 SLC25A27O95847 323 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 TLE2Q04725 743 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 KIAA1755Q5JYT7 1200 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 LCORLQ8N3X6 602 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 TRIM43Q96BQ3 446 aaPredicted RBP19.49■□□□□ 0.71
PUDP-203ENST00000424830 YTHDC1Q96MU7 727 aaKnown RBP19.49■□□□□ 0.71
PUDP-203ENST00000424830 VCPKMTQ9H867 229 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 IL1RAPL2Q9NP60 686 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 TMX2Q9Y320 296 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 TACC3Q9Y6A5 838 aa19.49■□□□□ 0.71
PUDP-203ENST00000424830 GOLIM4O00461 696 aa19.48■□□□□ 0.71
PUDP-203ENST00000424830 CLTBP09497 229 aa19.48■□□□□ 0.71
PUDP-203ENST00000424830 CYP2D6P10635 497 aa19.48■□□□□ 0.71
PUDP-203ENST00000424830 RLBP1P12271 317 aa19.48■□□□□ 0.71
PUDP-203ENST00000424830 SH3RF1Q7Z6J0 888 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms