RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 GOLGA8AA7E2F4 631 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 LIFRP42702 1097 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 METAP2P50579 478 aaKnown RBP eCLIP15.72■□□□□ 0.11
PRPF39-202ENST00000424478 TROAPQ12815 778 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 SPP2Q13103 211 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 OTUD5Q96G74 571 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 IPO9Q96P70 1041 aaKnown RBP15.72■□□□□ 0.11
PRPF39-202ENST00000424478 KANSL2Q9H9L4 492 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 FAM217BQ9NTX9 383 aaPredicted RBP15.72■□□□□ 0.11
PRPF39-202ENST00000424478 CTNND1O60716 968 aaKnown RBP15.72■□□□□ 0.11
PRPF39-202ENST00000424478 SGMS1Q86VZ5 419 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 SCYL3Q8IZE3 742 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 GPCPD1Q9NPB8 672 aa15.72■□□□□ 0.11
PRPF39-202ENST00000424478 PLIN4Q96Q06 1357 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 ASNSP08243 561 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 PTPRAP18433 802 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 MTMR2Q13614 643 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 ANKRD1Q15327 319 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 TTBK2Q6IQ55 1244 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 CATIPQ7Z7H3 387 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 FEZ1Q99689 392 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 PICK1Q9NRD5 415 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 ZNF112Q9UJU3 913 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 CENPFP49454 3210 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 WDR19Q8NEZ3 1342 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 CTDNEP1O95476 244 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 SLC16A2P36021 539 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 DGKHQ86XP1 1220 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 UBA5Q9GZZ9 404 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 TCP11L1Q9NUJ3 509 aa15.71■□□□□ 0.11
PRPF39-202ENST00000424478 DOCK1Q14185 1865 aa15.71■□□□□ 0.1
PRPF39-202ENST00000424478 SNAP25P60880 206 aa15.71■□□□□ 0.1
PRPF39-202ENST00000424478 MAP3K9P80192 1104 aa15.71■□□□□ 0.1
PRPF39-202ENST00000424478 BECN1Q14457 450 aa15.71■□□□□ 0.1
PRPF39-202ENST00000424478 GTF3C6Q969F1 213 aa15.71■□□□□ 0.1
PRPF39-202ENST00000424478 GJB4Q9NTQ9 266 aa15.71■□□□□ 0.1
PRPF39-202ENST00000424478 TOP1P11387 765 aaKnown RBP15.7■□□□□ 0.1
PRPF39-202ENST00000424478 GRM1Q13255 1194 aa15.7■□□□□ 0.1
PRPF39-202ENST00000424478 ALDH8A1Q9H2A2 487 aaPredicted RBP15.7■□□□□ 0.1
PRPF39-202ENST00000424478 GBA2Q9HCG7 927 aaPredicted RBP15.7■□□□□ 0.1
PRPF39-202ENST00000424478 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
PRPF39-202ENST00000424478 DAXXQ9UER7 740 aaPredicted RBP15.7■□□□□ 0.1
PRPF39-202ENST00000424478 F5H6K3 240 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 PFKFB2O60825 505 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 TAL1P17542 331 aaPredicted RBP15.69■□□□□ 0.1
PRPF39-202ENST00000424478 IREB2P48200 963 aaKnown RBP15.69■□□□□ 0.1
PRPF39-202ENST00000424478 KLRC3Q07444 240 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 CCDC96Q2M329 555 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 SLC35G1Q2M3R5 365 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 SYNE3Q6ZMZ3 975 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 FANCBQ8NB91 859 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 AIFM3Q96NN9 605 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 CSADQ9Y600 493 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 NDUFB10O96000 172 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 RTN1Q16799 776 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 FOXD4L5Q5VV16 416 aaPredicted RBP15.69■□□□□ 0.1
PRPF39-202ENST00000424478 FOXD4L4Q8WXT5 416 aaPredicted RBP15.69■□□□□ 0.1
PRPF39-202ENST00000424478 PDHBP11177 359 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 HMGCS2P54868 508 aa15.69■□□□□ 0.1
PRPF39-202ENST00000424478 ZNF274Q96GC6 653 aaPredicted RBP15.69■□□□□ 0.1
PRPF39-202ENST00000424478 IRF6O14896 467 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 HTRA3P83110 453 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 HOOK2Q96ED9 719 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 GJA5P36382 358 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 EVCP57679 992 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 SLFN13Q68D06 897 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 FBXL16Q8N461 479 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 FBXO28Q9NVF7 368 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 NYAP2Q9P242 653 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 MAD2L2Q9UI95 211 aa15.68■□□□□ 0.1
PRPF39-202ENST00000424478 PKP1Q13835 747 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 FAM83BQ5T0W9 1011 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 ARMC9Q7Z3E5 817 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
PRPF39-202ENST00000424478 OPTNQ96CV9 577 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 PHIPQ8WWQ0 1821 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 CPLX1O14810 134 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 NOVP48745 357 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 MCM2P49736 904 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 ANKRD13AQ8IZ07 590 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 ANKS1AQ92625 1134 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 ARHGEF10LQ9HCE6 1279 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 PAPPA2Q9BXP8 1791 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 PEX10O60683 326 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 HUNKP57058 714 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 HOMER1Q86YM7 354 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 TMTC2Q8N394 836 aa15.67■□□□□ 0.1
PRPF39-202ENST00000424478 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
PRPF39-202ENST00000424478 PTPDC1A2A3K4 754 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
PRPF39-202ENST00000424478 SLC1A4P43007 532 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 OTUD7BQ6GQQ9 843 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 CTCFLQ8NI51 663 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-202ENST00000424478 ZSCAN31Q96LW9 406 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-202ENST00000424478 SLC26A6Q9BXS9 759 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 TMX2Q9Y320 296 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 CYTH3O43739 400 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 GUCY1B3Q02153 619 aa15.66■□□□□ 0.1
PRPF39-202ENST00000424478 IKQ13123 557 aaPredicted RBP15.66■□□□□ 0.1
PRPF39-202ENST00000424478 C2orf69Q8N8R5 385 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms