RNA–Protein interactions for RNA: ENST00000424192.6

LMO3-206, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 983 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-206ENST00000424192 HAND2P61296 217 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 TRDNQ13061 729 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 TAF1CQ15572 869 aaPredicted RBP13.83□□□□□ -0.2
LMO3-206ENST00000424192 CCDC178Q5BJE1 867 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 GTF3C2Q8WUA4 911 aaPredicted RBP13.83□□□□□ -0.2
LMO3-206ENST00000424192 KRT23Q9C075 422 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 RNF186Q9NXI6 227 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
LMO3-206ENST00000424192 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.83□□□□□ -0.2
LMO3-206ENST00000424192 TTLL13PA6NNM8 815 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 RANBP6O60518 1105 aaKnown RBP13.82□□□□□ -0.2
LMO3-206ENST00000424192 TTLL1O95922 423 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 GUCY1A2P33402 732 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 JAG1P78504 1218 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 SHROOM1Q2M3G4 852 aaPredicted RBP13.82□□□□□ -0.2
LMO3-206ENST00000424192 CCDC84Q86UT8 332 aaPredicted RBP13.82□□□□□ -0.2
LMO3-206ENST00000424192 TBC1D10CQ8IV04 446 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 STK11IPQ8N1F8 1099 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 TMEM106CQ9BVX2 250 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 LSG1Q9H089 658 aaKnown RBP13.82□□□□□ -0.2
LMO3-206ENST00000424192 ZFYVE28Q9HCC9 887 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 TMX2Q9Y320 296 aa13.82□□□□□ -0.2
LMO3-206ENST00000424192 RBM8AQ9Y5S9 174 aaKnown RBP13.82□□□□□ -0.2
LMO3-206ENST00000424192 IGKV6D-41A0A0C4DH26 115 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 SMIM22K7EJ46 135 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 PDHXO00330 501 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 TRPA1O75762 1119 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 TFAP4Q01664 338 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 PTH1RQ03431 593 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 MOGSQ13724 837 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 RRP12Q5JTH9 1297 aaKnown RBP13.81□□□□□ -0.2
LMO3-206ENST00000424192 RALYLQ86SE5 291 aaKnown RBP13.81□□□□□ -0.2
LMO3-206ENST00000424192 IQCA1Q86XH1 822 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 PTPN18Q99952 460 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 MTMR4Q9NYA4 1195 aa13.81□□□□□ -0.2
LMO3-206ENST00000424192 STK25O00506 426 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
LMO3-206ENST00000424192 OSBPP22059 807 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 IRX3P78415 501 aaPredicted RBP13.8□□□□□ -0.2
LMO3-206ENST00000424192 ATP2B2Q01814 1243 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 HS6ST3Q8IZP7 471 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
LMO3-206ENST00000424192 CEP95Q96GE4 821 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 TCP11L1Q9NUJ3 509 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 NEDD4P46934 1319 aa13.8□□□□□ -0.2
LMO3-206ENST00000424192 WDR46O15213 610 aaKnown RBP13.79□□□□□ -0.2
LMO3-206ENST00000424192 FOXN1O15353 648 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
LMO3-206ENST00000424192 CYP21A2P08686 494 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 ZKSCAN1P17029 563 aaPredicted RBP13.79□□□□□ -0.2
LMO3-206ENST00000424192 VCAM1P19320 739 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
LMO3-206ENST00000424192 KRT32Q14532 448 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 SART3Q15020 963 aaKnown RBP13.79□□□□□ -0.2
LMO3-206ENST00000424192 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 GPAT2Q6NUI2 795 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 GMCL1P1Q8NEA9 526 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.79□□□□□ -0.2
LMO3-206ENST00000424192 STX8Q9UNK0 236 aa13.79□□□□□ -0.2
LMO3-206ENST00000424192 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 TLR2O60603 784 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 HSPA8P11142 646 aaKnown RBP13.78□□□□□ -0.2
LMO3-206ENST00000424192 MCCP23508 829 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 GCLCP48506 637 aaPredicted RBP13.78□□□□□ -0.2
LMO3-206ENST00000424192 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 CRHR2Q13324 411 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 ZYXQ15942 572 aaKnown RBP13.78□□□□□ -0.2
LMO3-206ENST00000424192 ASTLQ6HA08 431 aaPredicted RBP13.78□□□□□ -0.2
LMO3-206ENST00000424192 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 MKL1Q969V6 931 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 TTC14Q96N46 770 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 UBAC1Q9BSL1 405 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 PRDM10Q9NQV6 1147 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 EMILIN3Q9NT22 766 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 MYPNQ86TC9 1320 aa13.78□□□□□ -0.2
LMO3-206ENST00000424192 PCNTO95613 3336 aa13.77□□□□□ -0.2
LMO3-206ENST00000424192 A0A1W2PRG0 241 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 SLC27A2O14975 620 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 KDM4AO75164 1064 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 NOVP48745 357 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
LMO3-206ENST00000424192 ARHGEF6Q15052 776 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 TREML2Q5T2D2 321 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 CREB3L3Q68CJ9 461 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 DGKHQ86XP1 1220 aa13.77□□□□□ -0.21
LMO3-206ENST00000424192 CLEC10AQ8IUN9 316 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms